Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 2X6    

Bonds between two atoms of the molecule

Total Number of Bonds: 56


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C3 C4 C C sing 1.53 N N
2 C3 C2 C C sing 1.53 N N
3 C4 C5 C C sing 1.53 N N
4 C2 C1 C C sing 1.53 N N
5 C5 N1 C N sing 1.46 N N
6 C5 C C C sing 1.53 N N
7 N1 C6 N C sing 1.39 N N
8 C1 C C C sing 1.53 N N
9 C N C N sing 1.47 N N
10 C6 N6 C N doub 1.33 N Y
11 C6 C7 C C sing 1.39 N Y
12 C15 C14 C C doub 1.39 N Y
13 C15 C16 C C sing 1.37 N Y
14 N6 C12 N C sing 1.32 N Y
15 C7 C8 C C doub 1.39 N Y
16 C14 C13 C C sing 1.38 N Y
17 C16 C17 C C doub 1.4 N Y
18 C12 N4 C N sing 1.38 N N
19 C12 C9 C C doub 1.4 N Y
20 C8 C9 C C sing 1.42 N Y
21 C8 N3 C N sing 1.35 N N
22 C13 N4 C N sing 1.4 N N
23 C13 C18 C C doub 1.4 N Y
24 C17 C18 C C sing 1.4 N Y
25 C17 C20 C C sing 1.46 N Y
26 C9 C10 C C sing 1.46 N N
27 N3 C11 N C doub 1.3 N N
28 C18 N5 C N sing 1.38 N Y
29 C20 C19 C C doub 1.34 N Y
30 C11 N2 C N sing 1.36 N N
31 C10 N2 C N sing 1.35 N N
32 C10 O C O doub 1.22 N N
33 N5 C19 N C sing 1.37 N Y
34 C1 H1 C H sing 1.09 N N
35 C1 H2 C H sing 1.09 N N
36 C2 H3 C H sing 1.09 N N
37 C2 H4 C H sing 1.09 N N
38 C3 H5 C H sing 1.09 N N
39 C3 H6 C H sing 1.09 N N
40 C11 H7 C H sing 1.08 N N
41 C14 H8 C H sing 1.08 N N
42 C15 H9 C H sing 1.08 N N
43 C16 H10 C H sing 1.08 N N
44 C19 H11 C H sing 1.08 N N
45 C20 H12 C H sing 1.08 N N
46 N2 H13 N H sing 0.97 N N
47 C7 H14 C H sing 1.08 N N
48 N1 H15 N H sing 0.97 N N
49 C5 H16 C H sing 1.09 N N
50 C4 H17 C H sing 1.09 N N
51 C4 H18 C H sing 1.09 N N
52 C H19 C H sing 1.09 N N
53 N H20 N H sing 1.01 N N
54 N H21 N H sing 1.01 N N
55 N4 H23 N H sing 0.97 N N
56 N5 H24 N H sing 0.97 N N