Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : 2BO    

Bonds between two atoms of the molecule

Total Number of Bonds: 42


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OT C O C doub 1.21 N N
2 O1P P O P doub 1.48 N N
3 C O C O sing 1.34 N N
4 C CA C C sing 1.51 N N
5 O2P P O P sing 1.61 N N
6 P O4P P O sing 1.61 N N
7 P O3P P O sing 1.61 N N
8 CA N C N sing 1.47 N N
9 CA CB C C sing 1.53 N N
10 N C4A N C sing 1.47 N N
11 O4P C5A O C sing 1.43 N N
12 C4A C4 C C sing 1.51 N N
13 O3 C3 O C sing 1.36 N N
14 CB CG C C sing 1.53 N N
15 CB OB C O sing 1.43 N N
16 C4 C3 C C doub 1.39 N Y
17 C4 C5 C C sing 1.39 N Y
18 C3 C2 C C sing 1.39 N Y
19 C5A C5 C C sing 1.51 N N
20 C5 C6 C C doub 1.38 N Y
21 C2 C2A C C sing 1.51 N N
22 C2 N1 C N doub 1.32 N Y
23 C6 N1 C N sing 1.32 N Y
24 C2A H1 C H sing 1.09 N N
25 C2A H2 C H sing 1.09 N N
26 C2A H3 C H sing 1.09 N N
27 O3 H4 O H sing 0.97 N N
28 C4A H5 C H sing 1.09 N N
29 C4A H6 C H sing 1.09 N N
30 C5A H7 C H sing 1.09 N N
31 C5A H8 C H sing 1.09 N N
32 C6 H9 C H sing 1.08 N N
33 O2P H10 O H sing 0.97 N N
34 O3P H11 O H sing 0.97 N N
35 N H12 N H sing 1.01 N N
36 CA H14 C H sing 1.09 N N
37 CB H15 C H sing 1.09 N N
38 OB H16 O H sing 0.97 N N
39 O H17 O H sing 0.97 N N
40 CG H18 C H sing 1.09 N N
41 CG H19 C H sing 1.09 N N
42 CG H20 C H sing 1.09 N N