Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 1OK    

Bonds between two atoms of the molecule

Total Number of Bonds: 71


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C7 C6 C C doub 1.3817025 N Y
2 C7 C8 C C sing 1.3820977 N Y
3 C6 C5 C C sing 1.3822912 N Y
4 C8 C3 C C doub 1.3829252 N Y
5 C5 C4 C C doub 1.3830911 N Y
6 C3 C4 C C sing 1.3817025 N Y
7 C3 S2 C S sing 1.762385 N N
8 C32 C31 C C sing 1.5299206 N N
9 O38 S2 O S doub 1.4207903 N N
10 C31 O30 C O sing 1.4287368 N N
11 O36 C23 O C doub 1.2123028 N N
12 S2 O37 S O doub 1.4207184 N N
13 S2 N1 S N sing 1.6560936 N N
14 O30 C25 O C sing 1.360454 N N
15 C23 N1 C N sing 1.3474888 N N
16 C23 C21 C C sing 1.5074704 N N
17 C24 C25 C C doub 1.3841423 N Y
18 C24 C22 C C sing 1.382928 N Y
19 C25 C26 C C sing 1.3923448 N Y
20 N20 C21 N C sing 1.465071 N N
21 N20 C16 N C sing 1.3951756 N N
22 C21 C22 C C sing 1.506922 N N
23 C22 C28 C C doub 1.3822594 N Y
24 C26 O29 C O sing 1.3600475 N N
25 C26 C27 C C doub 1.3847704 N Y
26 C17 C16 C C doub 1.3995042 N Y
27 C17 C18 C C sing 1.3611014 N Y
28 O29 C33 O C sing 1.4292743 N N
29 C16 C15 C C sing 1.3795786 N Y
30 C28 C27 C C sing 1.3831052 N Y
31 C34 C33 C C sing 1.5303549 N N
32 C18 C13 C C doub 1.4014068 N Y
33 C33 C35 C C sing 1.530969 N N
34 C15 C12 C C doub 1.3997042 N Y
35 C13 C12 C C sing 1.4182373 N Y
36 C13 C14 C C sing 1.4118689 N Y
37 C12 C11 C C sing 1.4099985 N Y
38 N19 C14 N C sing 1.3841044 N N
39 C14 N9 C N doub 1.3202353 N Y
40 C11 C10 C C doub 1.3599725 N Y
41 N9 C10 N C sing 1.3261406 N Y
42 C18 H1 C H sing 1.0798713 N N
43 C17 H2 C H sing 1.0799065 N N
44 C15 H3 C H sing 1.0802875 N N
45 C21 H4 C H sing 1.0898132 N N
46 C24 H5 C H sing 1.0804379 N N
47 C11 H6 C H sing 1.0804898 N N
48 C34 H7 C H sing 1.0902793 N N
49 C34 H8 C H sing 1.0890666 N N
50 C34 H9 C H sing 1.0900105 N N
51 C27 H10 C H sing 1.0805466 N N
52 C33 H11 C H sing 1.0892626 N N
53 N1 H12 N H sing 0.9698005 N N
54 C4 H13 C H sing 1.0802639 N N
55 C5 H14 C H sing 1.0799435 N N
56 C6 H15 C H sing 1.0806627 N N
57 C7 H16 C H sing 1.0800301 N N
58 C8 H17 C H sing 1.0800954 N N
59 C10 H18 C H sing 1.0794924 N N
60 N19 H19 N H sing 0.9699696 N N
61 N19 H20 N H sing 0.9699263 N N
62 N20 H21 N H sing 0.969521 N N
63 C28 H22 C H sing 1.0797064 N N
64 C31 H23 C H sing 1.0906461 N N
65 C31 H24 C H sing 1.0897752 N N
66 C32 H25 C H sing 1.0901394 N N
67 C32 H26 C H sing 1.0895159 N N
68 C32 H27 C H sing 1.0899197 N N
69 C35 H28 C H sing 1.0892608 N N
70 C35 H29 C H sing 1.0899045 N N
71 C35 H30 C H sing 1.0906278 N N