Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
1O3
Bonds between two atoms of the molecule
Total Number of Bonds: 43
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
BR1
C3
BR
C
sing
1.89
N
N
2
C24
C23
C
C
doub
1.38
N
Y
3
C24
C25
C
C
sing
1.38
N
Y
4
C23
C22
C
C
sing
1.38
N
Y
5
C25
C26
C
C
doub
1.38
N
Y
6
C22
C21
C
C
doub
1.39
N
Y
7
C3
C4
C
C
doub
1.38
N
Y
8
C3
C2
C
C
sing
1.38
N
Y
9
C26
C21
C
C
sing
1.39
N
Y
10
C21
O20
C
O
sing
1.36
N
N
11
C4
C5
C
C
sing
1.38
N
Y
12
C2
C1
C
C
doub
1.38
N
Y
13
O20
C14
O
C
sing
1.36
N
N
14
O19
C17
O
C
doub
1.22
N
N
15
C5
C6
C
C
doub
1.38
N
Y
16
C13
C14
C
C
doub
1.38
N
Y
17
C13
C12
C
C
sing
1.4
N
Y
18
C1
F27
C
F
sing
1.35
N
N
19
C1
C6
C
C
sing
1.38
N
Y
20
C14
C15
C
C
sing
1.39
N
Y
21
C17
C12
C
C
sing
1.47
N
N
22
C17
O18
C
O
sing
1.35
N
N
23
C6
S7
C
S
sing
1.76
N
N
24
C12
C11
C
C
doub
1.4
N
Y
25
C15
C16
C
C
doub
1.38
N
Y
26
C11
C16
C
C
sing
1.39
N
Y
27
C11
N10
C
N
sing
1.39
N
N
28
S7
N10
S
N
sing
1.66
N
N
29
S7
O9
S
O
doub
1.42
N
N
30
S7
O8
S
O
doub
1.42
N
N
31
C2
H1
C
H
sing
1.08
N
N
32
C4
H2
C
H
sing
1.08
N
N
33
C5
H3
C
H
sing
1.08
N
N
34
N10
H4
N
H
sing
0.97
N
N
35
C13
H5
C
H
sing
1.08
N
N
36
C15
H6
C
H
sing
1.08
N
N
37
C16
H7
C
H
sing
1.08
N
N
38
O18
H8
O
H
sing
0.97
N
N
39
C22
H9
C
H
sing
1.08
N
N
40
C23
H10
C
H
sing
1.08
N
N
41
C24
H11
C
H
sing
1.08
N
N
42
C25
H12
C
H
sing
1.08
N
N
43
C26
H13
C
H
sing
1.08
N
N