Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : 1F5    

Bonds between two atoms of the molecule

Total Number of Bonds: 100


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OBR CAH O C sing 1.4264926 N N
2 CAP CAO C C sing 1.5325762 N N
3 CAP CAQ C C sing 1.5044683 N N
4 CAO CAN C C sing 1.549404 N N
5 CAT CAR C C sing 1.5300281 N N
6 OAJ CAK O C sing 1.4281576 N N
7 OAJ CAI O C sing 1.4291042 N N
8 CAS CAR C C sing 1.5299686 N N
9 CAH CAI C C sing 1.5285683 N N
10 CAH CAL C C sing 1.5303967 N N
11 CAH CAG C C sing 1.5303532 N N
12 CAQ CAR C C sing 1.50481 N N
13 CAQ CAV C C doub 1.3110088 N N
14 CAM CAL C C doub 1.3049724 E N
15 CAM CAN C C sing 1.4976047 N N
16 CAL CAE C C sing 1.4860084 N N
17 CAN CAV C C sing 1.5048269 N N
18 CAN CAU C C sing 1.5251892 N N
19 CAG CAF C C sing 1.5362927 N N
20 CAF CAE C C sing 1.5509593 N N
21 OBQ CBP O C sing 1.4289773 N N
22 OBQ CBO O C sing 1.4291078 N N
23 CAE CAC C C sing 1.4881418 N N
24 CAV CAW C C sing 1.5097897 N N
25 CBP CBO C C sing 1.5305035 N N
26 OBJ CBM O C sing 1.4510493 N N
27 OBJ CBG O C sing 1.4410254 N N
28 CBB CBA C C sing 1.5296438 N N
29 CBB OBC C O sing 1.4295852 N N
30 CBN CBM C C sing 1.5297676 N N
31 CBO CBM C C sing 1.5299517 N N
32 CBA CBG C C sing 1.4926815 N N
33 CBA OAZ C O sing 1.4266335 N N
34 CAW CAB C C sing 1.5106492 N N
35 CAW OAX C O sing 1.4199286 N N
36 CAC CAB C C sing 1.5040326 N N
37 CAC CAD C C sing 1.5340877 N N
38 CBM CBI C C sing 1.5601544 N N
39 CBD OBC C O sing 1.4287364 N N
40 CAB OAA C O sing 1.4315184 N N
41 CBG CBF C C sing 1.5376924 N N
42 CBG OBH C O sing 1.4584787 N N
43 OAX CAY O C sing 1.4295866 N N
44 OAZ CAY O C sing 1.4294705 N N
45 CBF OBL C O sing 1.4527154 N N
46 CBF CBE C C sing 1.5200082 N N
47 OBH CBI O C sing 1.4707923 N N
48 CBI OBL C O sing 1.45655 N N
49 CAY CBE C C sing 1.5256703 N N
50 CBE OBK C O sing 1.4287789 N N
51 CBP H1 C H sing 1.0898192 N N
52 CBP H2 C H sing 1.0896248 N N
53 CBO H3 C H sing 1.0896908 N N
54 CBN H4 C H sing 1.0901068 N N
55 CBN H5 C H sing 1.089706 N N
56 CBN H6 C H sing 1.0895628 N N
57 CBA H7 C H sing 1.0903527 N N
58 CBB H8 C H sing 1.0890005 N N
59 CBB H9 C H sing 1.0903128 N N
60 CBD H10 C H sing 1.0902193 N N
61 CBD H11 C H sing 1.089426 N N
62 CBD H12 C H sing 1.0896174 N N
63 CBI H13 C H sing 1.0892755 N N
64 CBF H14 C H sing 1.0893874 N N
65 CBE H15 C H sing 1.0903554 N N
66 OBK H16 O H sing 0.9673324 N N
67 CAY H17 C H sing 1.0894008 N N
68 CAW H18 C H sing 1.1191809 N N
69 CAB H19 C H sing 1.1266774 N N
70 OAA H20 O H sing 0.9671241 N N
71 CAC H21 C H sing 1.1395148 N N
72 CAD H22 C H sing 1.0900853 N N
73 CAD H23 C H sing 1.090316 N N
74 CAD H24 C H sing 1.0898412 N N
75 CAR H25 C H sing 1.0909895 N N
76 CAT H26 C H sing 1.0897936 N N
77 CAT H27 C H sing 1.090476 N N
78 CAT H28 C H sing 1.0901234 N N
79 CAS H29 C H sing 1.0898023 N N
80 CAS H30 C H sing 1.090454 N N
81 CAS H31 C H sing 1.0895325 N N
82 CAP H32 C H sing 1.0882463 N N
83 CAP H33 C H sing 1.0859517 N N
84 CAO H34 C H sing 1.0823872 N N
85 CAO H35 C H sing 1.083078 N N
86 CAU H36 C H sing 1.0899252 N N
87 CAU H37 C H sing 1.0904778 N N
88 CAU H38 C H sing 1.0894172 N N
89 CAM H39 C H sing 1.1057224 N N
90 CAE H40 C H sing 1.1314318 N N
91 CAF H41 C H sing 1.0824579 N N
92 CAF H42 C H sing 1.0804008 N N
93 CAG H43 C H sing 1.0870768 N N
94 CAG H44 C H sing 1.0873297 N N
95 OBR H45 O H sing 0.966939 N N
96 CAI H46 C H sing 1.0906209 N N
97 CAI H47 C H sing 1.0904105 N N
98 CAK H48 C H sing 1.0904421 N N
99 CAK H49 C H sing 1.0892837 N N
100 CAK H50 C H sing 1.0901197 N N