Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : 1DZ    

Bonds between two atoms of the molecule

Total Number of Bonds: 37


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C09 C10 C C doub 1.3830701 N Y
2 C09 C08 C C sing 1.3796177 N Y
3 C10 C11 C C sing 1.3844179 N Y
4 C08 C06 C C doub 1.3952928 N Y
5 C11 C12 C C doub 1.3788017 N Y
6 C06 C12 C C sing 1.3960842 N Y
7 C06 C01 C C sing 1.4795084 N N
8 C05 C01 C C doub 1.3663236 N Y
9 C05 C04 C C sing 1.412746 N Y
10 C01 N02 C N sing 1.3665717 N Y
11 O20 C19 O C doub 1.2153243 N N
12 C18 C16 C C sing 1.5072969 N N
13 C17 C16 C C doub 1.3802507 N Y
14 C17 C07 C C sing 1.3894261 N Y
15 C04 C19 C C sing 1.4753104 N N
16 C04 N03 C N doub 1.3198291 N Y
17 N02 N03 N N sing 1.2840234 N Y
18 N02 C07 N C sing 1.4001993 N N
19 C19 O21 C O sing 1.3470416 N N
20 C16 C15 C C sing 1.3833543 N Y
21 C07 C13 C C doub 1.3882773 N Y
22 C15 C14 C C doub 1.3829805 N Y
23 C13 C14 C C sing 1.3812606 N Y
24 C05 H051 C H sing 1.0800579 N N
25 C08 H081 C H sing 1.0803152 N N
26 C09 H091 C H sing 1.0798495 N N
27 C10 H101 C H sing 1.0800745 N N
28 C11 H111 C H sing 1.080617 N N
29 C12 H121 C H sing 1.0797472 N N
30 C13 H131 C H sing 1.0801945 N N
31 C14 H141 C H sing 1.0798694 N N
32 C15 H151 C H sing 1.0803504 N N
33 C17 H171 C H sing 1.0801277 N N
34 C18 H181 C H sing 1.0907795 N N
35 C18 H183 C H sing 1.0898963 N N
36 C18 H182 C H sing 1.0893925 N N
37 O21 H1 O H sing 0.9666752 N N