Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 1AK    

Bonds between two atoms of the molecule

Total Number of Bonds: 57


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C06 CL1 C CL sing 1.7354705 N N
2 C02 C01 C C doub 1.3821132 N Y
3 C01 C06 C C sing 1.382293 N Y
4 C01 H01 C H sing 1.0801606 N N
5 C02 C03 C C sing 1.3831432 N Y
6 C02 H02 C H sing 1.0800014 N N
7 C03 C04 C C doub 1.381475 N Y
8 C03 H03 C H sing 1.0798246 N N
9 C04 C05 C C sing 1.388487 N Y
10 C04 H04 C H sing 1.0801269 N N
11 C06 C05 C C doub 1.389686 N Y
12 C05 N08 C N sing 1.400355 N N
13 N08 C09 N C sing 1.37168 N Y
14 N08 C12 N C sing 1.3743263 N Y
15 C28 C09 C C sing 1.4775013 N N
16 C09 N10 C N doub 1.3171808 N Y
17 N10 N11 N N sing 1.284963 N Y
18 C12 N11 C N doub 1.3218404 N Y
19 C12 C13 C C sing 1.4627228 N N
20 C13 C14 C C doub 1.3531368 E N
21 C13 H13 C H sing 1.080225 N N
22 C15 C14 C C sing 1.4613829 N N
23 C14 H14 C H sing 1.080342 N N
24 O27 C15 O C sing 1.3503404 N Y
25 C15 N16 C N doub 1.3195488 N Y
26 N17 N16 N N sing 1.2863919 N Y
27 C18 N17 C N doub 1.3164668 N Y
28 C19 C18 C C sing 1.4753292 N N
29 O27 C18 O C sing 1.3486723 N Y
30 C24 C19 C C doub 1.3982679 N Y
31 C19 C20 C C sing 1.3978248 N Y
32 C21 C20 C C doub 1.3665317 N Y
33 C20 H20 C H sing 1.079643 N N
34 C22 C21 C C sing 1.3989156 N Y
35 C21 H21 C H sing 1.0796008 N N
36 C25 C22 C C sing 1.432029 N N
37 C23 C22 C C doub 1.3978248 N Y
38 C23 C24 C C sing 1.3666679 N Y
39 C23 H23 C H sing 1.0802518 N N
40 C24 H24 C H sing 1.0798801 N N
41 N26 C25 N C trip 1.1358953 N N
42 C29 C28 C C doub 1.3952193 N Y
43 C28 N33 C N sing 1.3298271 N Y
44 C30 C29 C C sing 1.3839122 N Y
45 C29 H29 C H sing 1.0797727 N N
46 C30 C31 C C doub 1.3878163 N Y
47 C30 H30 C H sing 1.0799028 N N
48 S34 C31 S C sing 1.762032 N N
49 C31 C32 C C sing 1.3844435 N Y
50 C32 N33 C N doub 1.3157591 N Y
51 C32 H32 C H sing 1.0802028 N N
52 C37 S34 C S sing 1.8145239 N N
53 O35 S34 O S doub 1.4205077 N N
54 S34 O36 S O doub 1.4207801 N N
55 C37 H37 C H sing 1.0900812 N N
56 C37 H37A C H sing 1.0905379 N N
57 C37 H37B C H sing 1.0902394 N N