Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 16B    

Bonds between two atoms of the molecule

Total Number of Bonds: 37


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OAC NAB O N sing 1.42 N N
2 NAB CAH N C sing 1.38 N N
3 CAH CAI C C sing 1.41 N N
4 CAH NAG C N doub 1.33 N N
5 CAI CAN C C doub 1.35 N N
6 NAG CAL N C sing 1.33 N N
7 CAN NAM C N sing 1.36 N N
8 CAL NAM C N sing 1.35 N N
9 CAL OAK C O doub 1.22 N N
10 NAM C1' N C sing 1.47 N N
11 O2' C2' O C sing 1.43 N N
12 C2' C1' C C sing 1.55 N N
13 C2' C3' C C sing 1.55 N N
14 C1' O4' C O sing 1.44 N N
15 O4' C4' O C sing 1.44 N N
16 OAA PAE O P doub 1.48 N N
17 C3' C4' C C sing 1.54 N N
18 C3' O3' C O sing 1.43 N N
19 C5' C4' C C sing 1.53 N N
20 C5' O5' C O sing 1.43 N N
21 O5' PAE O P sing 1.61 N N
22 PAE OAD P O sing 1.61 N N
23 PAE OAF P O sing 1.61 N N
24 OAD H1 O H sing 0.97 N N
25 OAF H2 O H sing 0.97 N N
26 C5' H3 C H sing 1.09 N N
27 C5' H4 C H sing 1.09 N N
28 C4' H5 C H sing 1.09 N N
29 C3' H6 C H sing 1.09 N N
30 O3' H7 O H sing 0.97 N N
31 C2' H8 C H sing 1.09 N N
32 O2' H9 O H sing 0.97 N N
33 C1' H10 C H sing 1.09 N N
34 CAN H11 C H sing 1.08 N N
35 CAI H12 C H sing 1.08 N N
36 NAB H13 N H sing 0.97 N N
37 OAC H14 O H sing 0.97 N N