Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 13L    

Bonds between two atoms of the molecule

Total Number of Bonds: 75


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C27 C29 C C sing 1.5294931 N N
2 C29 C26 C C sing 1.5302068 N N
3 C29 C13 C C sing 1.5066301 N N
4 C4 C13 C C doub 1.3829052 N Y
5 C4 C6 C C sing 1.3807943 N Y
6 C13 C5 C C sing 1.3829751 N Y
7 C6 C14 C C doub 1.3893718 N Y
8 C5 C7 C C doub 1.3808497 N Y
9 C14 C7 C C sing 1.3895115 N Y
10 C14 N36 C N sing 1.3982582 N N
11 N36 C18 N C sing 1.3478523 N N
12 C3 C1 C C doub 1.379647 N Y
13 C3 C12 C C sing 1.397351 N Y
14 C18 C12 C C sing 1.4773906 N N
15 C18 O37 C O doub 1.2168673 N N
16 C1 C2 C C sing 1.3818799 N Y
17 C12 C8 C C doub 1.3933367 N Y
18 C2 C11 C C doub 1.3942026 N Y
19 C8 C11 C C sing 1.3920949 N Y
20 C11 C15 C C sing 1.4828234 N N
21 C25 C28 C C sing 1.5302398 N N
22 C15 N32 C N doub 1.3120846 N Y
23 C15 C10 C C sing 1.4631535 N Y
24 N32 N33 N N sing 1.3984113 N Y
25 C22 N34 C N sing 1.4693853 N N
26 C22 C20 C C sing 1.5318025 N N
27 C23 N34 C N sing 1.4691297 N N
28 C23 C24 C C sing 1.531555 N N
29 N34 C19 N C sing 1.3480853 N N
30 N35 C17 N C sing 1.3813978 N N
31 C28 C19 C C sing 1.5061507 N N
32 C10 C17 C C doub 1.4044117 N Y
33 C10 C16 C C sing 1.4078796 N Y
34 C19 O38 C O doub 1.2135147 N N
35 N33 C24 N C sing 1.4645156 N N
36 N33 C16 N C sing 1.3629156 N Y
37 C20 C21 C C sing 1.5300196 N N
38 C21 C24 C C sing 1.5304865 N N
39 C17 N31 C N sing 1.3289899 N Y
40 C16 N30 C N doub 1.3329475 N Y
41 N31 C9 N C doub 1.3205824 N Y
42 N30 C9 N C sing 1.3153175 N Y
43 C4 H1 C H sing 1.0804077 N N
44 C7 H2 C H sing 1.0800166 N N
45 C6 H3 C H sing 1.0797209 N N
46 C9 H4 C H sing 1.0803226 N N
47 C20 H5 C H sing 1.0899385 N N
48 C20 H6 C H sing 1.0905302 N N
49 C21 H7 C H sing 1.0900105 N N
50 C21 H8 C H sing 1.0897375 N N
51 C8 H9 C H sing 1.0799787 N N
52 C26 H10 C H sing 1.0897183 N N
53 C26 H11 C H sing 1.0904119 N N
54 C26 H12 C H sing 1.0895844 N N
55 C1 H13 C H sing 1.0801657 N N
56 C2 H14 C H sing 1.0807631 N N
57 C3 H15 C H sing 1.0804819 N N
58 C5 H16 C H sing 1.0808479 N N
59 C22 H17 C H sing 1.0891029 N N
60 C22 H18 C H sing 1.089728 N N
61 C23 H19 C H sing 1.0899459 N N
62 C23 H20 C H sing 1.0901793 N N
63 C24 H21 C H sing 1.0903124 N N
64 C25 H22 C H sing 1.0899261 N N
65 C25 H23 C H sing 1.0898743 N N
66 C25 H24 C H sing 1.0903509 N N
67 C27 H25 C H sing 1.090588 N N
68 C27 H26 C H sing 1.0897183 N N
69 C27 H27 C H sing 1.0895844 N N
70 C28 H28 C H sing 1.0899881 N N
71 C28 H29 C H sing 1.0900487 N N
72 C29 H30 C H sing 1.0902977 N N
73 N35 H31 N H sing 0.9699619 N N
74 N35 H32 N H sing 0.9702881 N N
75 N36 H33 N H sing 0.9692951 N N