Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 12S    

Bonds between two atoms of the molecule

Total Number of Bonds: 65


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C17 C14 C C sing 1.51 N N
2 C14 C15 C C doub 1.38 N Y
3 C14 C13 C C sing 1.39 N Y
4 C15 C16 C C sing 1.39 N Y
5 C13 C12 C C doub 1.38 N Y
6 C16 N16 C N sing 1.39 N N
7 C16 N11 C N doub 1.32 N Y
8 C12 N11 C N sing 1.32 N Y
9 C12 C18 C C sing 1.51 N N
10 C19 C18 C C sing 1.53 N N
11 C19 C3 C C sing 1.51 N N
12 C2 C3 C C doub 1.38 N Y
13 C2 C1 C C sing 1.38 N Y
14 C7 C1 C C sing 1.51 N N
15 C7 C8 C C sing 1.53 N N
16 C3 C4 C C sing 1.38 N Y
17 C1 C6 C C doub 1.38 N Y
18 N10 C9 N C sing 1.47 N N
19 C8 C9 C C sing 1.53 N N
20 C4 C5 C C doub 1.38 N Y
21 C6 C5 C C sing 1.38 N Y
22 C5 C29 C C sing 1.51 N N
23 C29 C28 C C sing 1.53 N N
24 C28 C22 C C sing 1.51 N N
25 C22 N21 C N doub 1.32 N Y
26 C22 C23 C C sing 1.38 N Y
27 N21 C26 N C sing 1.32 N Y
28 C23 C24 C C doub 1.39 N Y
29 C26 N26 C N sing 1.39 N N
30 C26 C25 C C doub 1.39 N Y
31 C24 C25 C C sing 1.38 N Y
32 C24 C27 C C sing 1.51 N N
33 N26 H1 N H sing 0.97 N N
34 N26 H2 N H sing 0.97 N N
35 C25 H3 C H sing 1.08 N N
36 C27 H4 C H sing 1.09 N N
37 C27 H5 C H sing 1.09 N N
38 C27 H6 C H sing 1.09 N N
39 C23 H7 C H sing 1.08 N N
40 C28 H8 C H sing 1.09 N N
41 C28 H9 C H sing 1.09 N N
42 C29 H10 C H sing 1.09 N N
43 C29 H11 C H sing 1.09 N N
44 C4 H12 C H sing 1.08 N N
45 C6 H13 C H sing 1.08 N N
46 C7 H14 C H sing 1.09 N N
47 C7 H15 C H sing 1.09 N N
48 C8 H16 C H sing 1.09 N N
49 C8 H17 C H sing 1.09 N N
50 C9 H18 C H sing 1.09 N N
51 C9 H19 C H sing 1.09 N N
52 N10 H20 N H sing 1.01 N N
53 N10 H21 N H sing 1.01 N N
54 C2 H23 C H sing 1.08 N N
55 C19 H24 C H sing 1.09 N N
56 C19 H25 C H sing 1.09 N N
57 C18 H26 C H sing 1.09 N N
58 C18 H27 C H sing 1.09 N N
59 C13 H28 C H sing 1.08 N N
60 N16 H29 N H sing 0.97 N N
61 N16 H30 N H sing 0.97 N N
62 C15 H31 C H sing 1.08 N N
63 C17 H32 C H sing 1.09 N N
64 C17 H33 C H sing 1.09 N N
65 C17 H34 C H sing 1.09 N N