Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 10K    

Bonds between two atoms of the molecule

Total Number of Bonds: 43


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C12 O C O doub 1.2128161 N N
2 C1 S C S sing 1.7581652 N Y
3 C4 S C S sing 1.7585062 N Y
4 C2 C1 C C doub 1.3358035 N Y
5 C1 H1 C H sing 1.0805174 N N
6 N1 C13 N C sing 1.3948653 N N
7 N1 C12 N C sing 1.3472056 N N
8 N1 HN1 N H sing 0.96957827 N N
9 C2 C3 C C sing 1.3804445 N Y
10 C2 H2 C H sing 1.0796356 N N
11 N2 C13 N C sing 1.3533045 N Y
12 N2 N3 N N sing 1.4000375 N Y
13 C3 C4 C C doub 1.3471944 N Y
14 C3 H3 C H sing 1.0803676 N N
15 N3 C14 N C doub 1.3087834 N Y
16 C4 C5 C C sing 1.4784255 N Y
17 C10 C5 C C doub 1.3954046 N Y
18 C5 C6 C C sing 1.3960931 N Y
19 C6 C7 C C doub 1.3799471 N Y
20 C6 H6 C H sing 1.0793262 N N
21 C8 C7 C C sing 1.3837044 N Y
22 C7 H7 C H sing 1.0792762 N N
23 C9 C8 C C doub 1.3839494 N Y
24 C8 C11 C C sing 1.5062795 N N
25 C10 C9 C C sing 1.3799334 N Y
26 C9 H9 C H sing 1.0789981 N N
27 C10 H10 C H sing 1.080299 N N
28 C11 C12 C C sing 1.507561 N N
29 C11 H11 C H sing 1.090067 N N
30 C11 H11A C H sing 1.0900885 N N
31 C13 C15 C C doub 1.3607237 N Y
32 C14 C15 C C sing 1.3971181 N Y
33 C14 C16 C C sing 1.5079801 N N
34 C15 H15 C H sing 1.080269 N N
35 C16 C18 C C sing 1.5301222 N N
36 C16 C17 C C sing 1.5297457 N N
37 C16 H16 C H sing 1.0898037 N N
38 C18 C17 C C sing 1.5299686 N N
39 C17 H17 C H sing 1.0900775 N N
40 C17 H17A C H sing 1.0894228 N N
41 C18 H18 C H sing 1.0900922 N N
42 C18 H18A C H sing 1.0900514 N N
43 N2 HN2 N H sing 0.9699428 N N