Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0YP    

Bonds between two atoms of the molecule

Total Number of Bonds: 55


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C02 O03 C O sing 1.43 N N
2 C6 C7 C C sing 1.53 N N
3 C6 C5 C C sing 1.53 N N
4 C7 C8 C C sing 1.53 N N
5 O03 C11 O C sing 1.36 N N
6 C5 C4 C C sing 1.53 N N
7 C8 N2 C N sing 1.47 N N
8 C12 C11 C C doub 1.39 N Y
9 C12 C13 C C sing 1.38 N Y
10 BR1 C9 BR C sing 1.89 N N
11 C11 C10 C C sing 1.4 N Y
12 C4 N2 C N sing 1.47 N N
13 N2 C3 N C sing 1.35 N N
14 C13 C14 C C doub 1.39 N Y
15 C10 C9 C C sing 1.47 N N
16 C10 C15 C C doub 1.4 N Y
17 C9 C2 C C doub 1.36 Z N
18 C3 C2 C C sing 1.47 N N
19 C3 O2 C O doub 1.22 N N
20 C2 N1 C N sing 1.4 N N
21 C14 C15 C C sing 1.38 N Y
22 O1 C1 O C doub 1.22 N N
23 N1 C1 N C sing 1.35 N N
24 C1 C16 C C sing 1.48 N N
25 C16 C17 C C doub 1.4 N Y
26 C16 C21 C C sing 1.4 N Y
27 C17 C18 C C sing 1.38 N Y
28 C21 C20 C C doub 1.38 N Y
29 C18 C19 C C doub 1.38 N Y
30 C20 C19 C C sing 1.38 N Y
31 C19 N01 C N sing 1.48 N N
32 N01 O02 N O doub 1.22 N N
33 N01 O01 N O sing 1.22 N N
34 N1 H1 N H sing 0.97 N N
35 C4 H3 C H sing 1.09 N N
36 C4 H4 C H sing 1.09 N N
37 C5 H5 C H sing 1.09 N N
38 C5 H6 C H sing 1.09 N N
39 C6 H7 C H sing 1.09 N N
40 C6 H8 C H sing 1.09 N N
41 C7 H9 C H sing 1.09 N N
42 C7 H10 C H sing 1.09 N N
43 C8 H11 C H sing 1.09 N N
44 C8 H12 C H sing 1.09 N N
45 C12 H14 C H sing 1.08 N N
46 C13 H15 C H sing 1.08 N N
47 C14 H16 C H sing 1.08 N N
48 C15 H17 C H sing 1.08 N N
49 C17 H18 C H sing 1.08 N N
50 C18 H19 C H sing 1.08 N N
51 C20 H20 C H sing 1.08 N N
52 C21 H21 C H sing 1.08 N N
53 C02 H01 C H sing 1.09 N N
54 C02 H04 C H sing 1.09 N N
55 C02 H05 C H sing 1.09 N N