Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0YO    

Bonds between two atoms of the molecule

Total Number of Bonds: 49


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C19 N5 C N sing 1.46 N N
2 C19 C20 C C sing 1.53 N N
3 N5 C18 N C sing 1.35 N N
4 C20 C16 C C sing 1.51 N N
5 C18 O1 C O doub 1.22 N N
6 C18 C17 C C sing 1.47 N N
7 C16 C17 C C doub 1.39 N Y
8 C16 N4 C N sing 1.33 N Y
9 C17 C15 C C sing 1.4 N Y
10 N4 C14 N C sing 1.38 N Y
11 C15 C14 C C doub 1.36 N Y
12 C14 C4 C C sing 1.48 N N
13 C13 C12 C C doub 1.36 N Y
14 C13 C8 C C sing 1.41 N Y
15 C4 N2 C N doub 1.33 N Y
16 C4 C3 C C sing 1.41 N Y
17 N2 C1 N C sing 1.33 N Y
18 C12 C11 C C sing 1.39 N Y
19 C7 C8 C C doub 1.41 N Y
20 C7 C5 C C sing 1.39 N Y
21 C8 C9 C C sing 1.42 N Y
22 O2 C3 O C sing 1.36 N N
23 O2 C21 O C sing 1.43 N N
24 C3 C2 C C doub 1.39 N Y
25 C1 C5 C C sing 1.48 N N
26 C1 N1 C N doub 1.33 N Y
27 C11 C10 C C doub 1.36 N Y
28 C5 C6 C C doub 1.4 N Y
29 C9 C10 C C sing 1.41 N Y
30 C9 N3 C N doub 1.34 N Y
31 C2 N1 C N sing 1.32 N Y
32 C6 N3 C N sing 1.31 N Y
33 C2 H1 C H sing 1.08 N N
34 C7 H2 C H sing 1.08 N N
35 C10 H3 C H sing 1.08 N N
36 C11 H4 C H sing 1.08 N N
37 C12 H5 C H sing 1.08 N N
38 C13 H6 C H sing 1.08 N N
39 C15 H7 C H sing 1.08 N N
40 C19 H8 C H sing 1.09 N N
41 C20 H9 C H sing 1.09 N N
42 C20 H10 C H sing 1.09 N N
43 C21 H11 C H sing 1.09 N N
44 C21 H12 C H sing 1.09 N N
45 C21 H13 C H sing 1.09 N N
46 N4 H14 N H sing 0.97 N N
47 C6 H15 C H sing 1.08 N N
48 C19 H16 C H sing 1.09 N N
49 N5 H17 N H sing 0.97 N N