Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0Y4    

Bonds between two atoms of the molecule

Total Number of Bonds: 52


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N29 C28 N C doub 1.31 N Y
2 N29 C25 N C sing 1.34 N Y
3 C28 N27 C N sing 1.35 N Y
4 C25 N24 C N sing 1.4 N N
5 C25 C26 C C doub 1.35 N Y
6 N27 C30 N C sing 1.47 N N
7 N27 C26 N C sing 1.37 N Y
8 N24 C15 N C sing 1.38 N N
9 N21 C20 N C doub 1.31 N Y
10 N21 N16 N N sing 1.4 N Y
11 C20 C19 C C sing 1.41 N Y
12 N16 C15 N C sing 1.37 N Y
13 N16 C17 N C sing 1.37 N Y
14 C15 C14 C C doub 1.37 N Y
15 C19 C17 C C doub 1.41 N Y
16 C19 C22 C C sing 1.43 N N
17 C17 N18 C N sing 1.33 N Y
18 C14 C13 C C sing 1.4 N Y
19 C22 N23 C N trip 1.14 N N
20 N18 C13 N C doub 1.33 N Y
21 C13 N12 C N sing 1.38 N N
22 N12 C5 N C sing 1.4 N N
23 C5 C6 C C doub 1.39 N Y
24 C5 C4 C C sing 1.39 N Y
25 C6 C7 C C sing 1.39 N Y
26 C11 C9 C C sing 1.51 N N
27 C4 C3 C C doub 1.38 N Y
28 C9 O10 C O doub 1.21 N N
29 C9 N8 C N sing 1.35 N N
30 C7 N8 C N sing 1.4 N N
31 C7 C2 C C doub 1.39 N Y
32 C3 C2 C C sing 1.38 N Y
33 C2 C1 C C sing 1.51 N N
34 C1 H1 C H sing 1.09 N N
35 C1 H2 C H sing 1.09 N N
36 C1 H3 C H sing 1.09 N N
37 C3 H4 C H sing 1.08 N N
38 C11 H5 C H sing 1.09 N N
39 C11 H6 C H sing 1.09 N N
40 C11 H7 C H sing 1.09 N N
41 C14 H8 C H sing 1.08 N N
42 C20 H9 C H sing 1.08 N N
43 C30 H10 C H sing 1.09 N N
44 C30 H11 C H sing 1.09 N N
45 C30 H12 C H sing 1.09 N N
46 C4 H13 C H sing 1.08 N N
47 C6 H14 C H sing 1.08 N N
48 N8 H15 N H sing 0.97 N N
49 N12 H16 N H sing 0.97 N N
50 N24 H17 N H sing 0.97 N N
51 C26 H18 C H sing 1.08 N N
52 C28 H19 C H sing 1.08 N N