Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0V4    

Bonds between two atoms of the molecule

Total Number of Bonds: 82


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O5 C1 O C sing 1.4294034 N N
2 C2 C1 C C sing 1.5313275 N N
3 C1 O1 C O sing 1.4291584 N N
4 C1 H1 C H sing 1.0893604 N N
5 O1 CAH O C sing 1.4240944 N N
6 C2 C3 C C sing 1.5323348 N N
7 C2 O2 C O sing 1.428488 N N
8 C2 H2 C H sing 1.0896399 N N
9 O2 HO2 O H sing 0.967459 N N
10 C4 C3 C C sing 1.531371 N N
11 O3 C3 O C sing 1.4286959 N N
12 C3 H3 C H sing 1.0894995 N N
13 O3 HO3 O H sing 0.9670915 N N
14 C4 O4 C O sing 1.4289136 N N
15 C4 C5 C C sing 1.5302804 N N
16 C4 H4 C H sing 1.089828 N N
17 O4 HO4 O H sing 0.9665821 N N
18 C6 C5 C C sing 1.5308759 N N
19 O5 C5 O C sing 1.4288579 N N
20 C5 H5 C H sing 1.0904472 N N
21 O6 C6 O C sing 1.4287319 N N
22 C6 H6 C H sing 1.08896 N N
23 C6 H6A C H sing 1.0898683 N N
24 O6 HO6 O H sing 0.96707654 N N
25 CBI OAA C O sing 1.4290129 N N
26 CAP OAA C O sing 1.4293698 N N
27 CAQ CAB C C sing 1.530067 N N
28 CAI CAB C C sing 1.5027884 N N
29 CAB CAC C C sing 1.4912324 N N
30 CAB HAB C H sing 1.1455798 N N
31 CAD CAC C C sing 1.4922664 N N
32 CAC CAM C C sing 1.5462179 N N
33 CAC HAC C H sing 1.1289322 N N
34 CAE CAD C C doub 1.2998958 E N
35 CAD CAO C C sing 1.5302637 N N
36 CAF CAE C C sing 1.5117655 N N
37 CAE HAE C H sing 1.1005458 N N
38 CAW CAF C C sing 1.513151 N N
39 CAF CAG C C sing 1.510437 N N
40 CAF CAJ C C sing 1.5521501 N N
41 CAH CAG C C sing 1.5181943 N N
42 CAG CAL C C doub 1.304534 N N
43 CAH CAI C C sing 1.5046375 N N
44 CAH HAH C H sing 1.1215708 N N
45 OAR CAI O C sing 1.4259379 N N
46 CAI HAI C H sing 1.1371869 N N
47 CAJ CAK C C sing 1.5272187 N N
48 CAJ HAJ C H sing 1.0862375 N N
49 CAJ HAJA C H sing 1.0835747 N N
50 CAL CAK C C sing 1.5016438 N N
51 CAK HAK C H sing 1.0875942 N N
52 CAK HAKA C H sing 1.0903742 N N
53 CAL CAT C C sing 1.5062048 N N
54 CAN CAM C C sing 1.5347368 N N
55 CAM HAM C H sing 1.0847502 N N
56 CAM HAMA C H sing 1.0853119 N N
57 CAO CAN C C sing 1.5301977 N N
58 CAN HAN C H sing 1.0866044 N N
59 CAN HANA C H sing 1.0902771 N N
60 CAP CAO C C sing 1.5223407 N N
61 CAO HAO C H sing 1.0875417 N N
62 CAP HAP C H sing 1.0901766 N N
63 CAP HAPA C H sing 1.0898849 N N
64 CAQ HAQ C H sing 1.0905361 N N
65 CAQ HAQA C H sing 1.0907158 N N
66 CAQ HAQB C H sing 1.0893108 N N
67 OAR HOAR O H sing 0.96702945 N N
68 CAV CAT C C sing 1.5295113 N N
69 CAT CAU C C sing 1.529777 N N
70 CAT HAT C H sing 1.0900793 N N
71 CAU HAU C H sing 1.0900793 N N
72 CAU HAUA C H sing 1.0896692 N N
73 CAU HAUB C H sing 1.0900798 N N
74 CAV HAV C H sing 1.0898114 N N
75 CAV HAVA C H sing 1.0896692 N N
76 CAV HAVB C H sing 1.0900793 N N
77 CAW HAW C H sing 1.0904907 N N
78 CAW HAWA C H sing 1.0900187 N N
79 CAW HAWB C H sing 1.0900775 N N
80 CBI HBI C H sing 1.0900812 N N
81 CBI HBIA C H sing 1.0898615 N N
82 CBI HBIB C H sing 1.0906553 N N