Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0SD    

Bonds between two atoms of the molecule

Total Number of Bonds: 74


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C C1 C C sing 1.53 N N
2 O1 C1 O C sing 1.43 N N
3 C1 C2 C C sing 1.53 N N
4 C1 C3 C C sing 1.53 N N
5 C3 C7 C C sing 1.53 N N
6 C3 C4 C C sing 1.53 N N
7 C7 C6 C C sing 1.53 N N
8 C4 C5 C C sing 1.53 N N
9 C18 C17 C C sing 1.39 N Y
10 C18 C19 C C doub 1.36 N Y
11 C17 C16 C C doub 1.38 N Y
12 C6 N C N sing 1.47 N N
13 C19 C20 C C sing 1.41 N Y
14 C5 N C N sing 1.47 N N
15 C11 C10 C C doub 1.37 N Y
16 C11 C12 C C sing 1.41 N Y
17 N3 C12 N C doub 1.34 N Y
18 N3 C15 N C sing 1.32 N Y
19 C16 C15 C C sing 1.48 N N
20 C16 C21 C C sing 1.46 N Y
21 C10 C9 C C sing 1.39 N Y
22 N C8 N C sing 1.47 N N
23 C12 C13 C C sing 1.42 N Y
24 C15 N2 C N doub 1.33 N Y
25 C20 C21 C C sing 1.47 N Y
26 C20 N5 C N doub 1.32 N Y
27 C21 C22 C C doub 1.38 N Y
28 C9 N1 C N doub 1.31 N Y
29 C9 C8 C C sing 1.51 N N
30 C13 N1 C N sing 1.33 N Y
31 C13 C14 C C doub 1.46 N Y
32 N2 C14 N C sing 1.32 N Y
33 C14 N6 C N sing 1.38 N N
34 N5 N4 N N sing 1.4 N Y
35 C26 N6 C N sing 1.47 N N
36 C26 C25 C C sing 1.53 N N
37 C22 N4 C N sing 1.34 N Y
38 N6 C23 N C sing 1.47 N N
39 C23 C24 C C sing 1.53 N N
40 C25 O C O sing 1.43 N N
41 O C24 O C sing 1.43 N N
42 C H2 C H sing 1.09 N N
43 C H3 C H sing 1.09 N N
44 C H4 C H sing 1.09 N N
45 O1 H5 O H sing 0.97 N N
46 C2 H6 C H sing 1.09 N N
47 C2 H7 C H sing 1.09 N N
48 C2 H8 C H sing 1.09 N N
49 C3 H9 C H sing 1.09 N N
50 C4 H10 C H sing 1.09 N N
51 C4 H11 C H sing 1.09 N N
52 N4 H12 N H sing 0.97 N N
53 C5 H13 C H sing 1.09 N N
54 C5 H14 C H sing 1.09 N N
55 C6 H15 C H sing 1.09 N N
56 C6 H16 C H sing 1.09 N N
57 C7 H17 C H sing 1.09 N N
58 C7 H18 C H sing 1.09 N N
59 C8 H19 C H sing 1.09 N N
60 C8 H20 C H sing 1.09 N N
61 C10 H21 C H sing 1.08 N N
62 C11 H22 C H sing 1.08 N N
63 C17 H23 C H sing 1.08 N N
64 C18 H24 C H sing 1.08 N N
65 C19 H25 C H sing 1.08 N N
66 C22 H26 C H sing 1.08 N N
67 C23 H27 C H sing 1.09 N N
68 C23 H28 C H sing 1.09 N N
69 C24 H29 C H sing 1.09 N N
70 C24 H30 C H sing 1.09 N N
71 C25 H31 C H sing 1.09 N N
72 C25 H32 C H sing 1.09 N N
73 C26 H33 C H sing 1.09 N N
74 C26 H34 C H sing 1.09 N N