Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0RQ    

Bonds between two atoms of the molecule

Total Number of Bonds: 93


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1P C C C sing 1.51 N N
2 C1P C2P C C sing 1.53 N N
3 CH3 C C C sing 1.51 N N
4 C O C O doub 1.21 N N
5 C2P C3P C C sing 1.53 N N
6 C3P N4P C N sing 1.46 N N
7 N4P C5P N C sing 1.35 N N
8 C5P O5P C O doub 1.21 N N
9 C5P C6P C C sing 1.51 N N
10 C6P C7P C C sing 1.53 N N
11 C7P N8P C N sing 1.46 N N
12 N8P C9P N C sing 1.35 N N
13 OAP CAP O C sing 1.43 N N
14 O4A P2A O P doub 1.48 N N
15 C9P O9P C O doub 1.21 N N
16 C9P CAP C C sing 1.51 N N
17 O5A P2A O P sing 1.61 N N
18 CAP CBP C C sing 1.53 N N
19 P2A O6A P O sing 1.61 N N
20 P2A O3A P O sing 1.61 N N
21 O6A CCP O C sing 1.43 N N
22 CBP CCP C C sing 1.53 N N
23 CBP CDP C C sing 1.53 N N
24 CBP CEP C C sing 1.53 N N
25 O3A P1A O P sing 1.61 N N
26 O2A P1A O P doub 1.48 N N
27 P1A O5B P O sing 1.61 N N
28 P1A O1A P O sing 1.61 N N
29 C5B O5B C O sing 1.43 N N
30 C5B C4B C C sing 1.53 N N
31 O7A P3B O P doub 1.48 N N
32 C4B O4B C O sing 1.44 N N
33 C4B C3B C C sing 1.54 N N
34 O4B C1B O C sing 1.44 N N
35 C3B O3B C O sing 1.43 N N
36 C3B C2B C C sing 1.55 N N
37 P3B O3B P O sing 1.61 N N
38 P3B O9A P O sing 1.61 N N
39 P3B O8A P O sing 1.61 N N
40 C2B C1B C C sing 1.55 N N
41 C2B O2B C O sing 1.43 N N
42 C1B N9A C N sing 1.47 N N
43 C8A N9A C N sing 1.36 N Y
44 C8A N7A C N doub 1.3 N Y
45 N9A C4A N C sing 1.37 N Y
46 N7A C5M N C sing 1.35 N Y
47 C4A C5M C C doub 1.41 N Y
48 C4A N3A C N sing 1.33 N Y
49 C5M C6A C C sing 1.41 N Y
50 N3A C2A N C doub 1.32 N Y
51 C6A N6A C N sing 1.38 N N
52 C6A N1A C N doub 1.33 N Y
53 C2A N1A C N sing 1.32 N Y
54 O8A H1 O H sing 0.97 N N
55 O9A H2 O H sing 0.97 N N
56 O1A H3 O H sing 0.97 N N
57 O5A H4 O H sing 0.97 N N
58 CDP H5 C H sing 1.09 N N
59 CDP H6 C H sing 1.09 N N
60 CDP H7 C H sing 1.09 N N
61 CEP H8 C H sing 1.09 N N
62 CEP H9 C H sing 1.09 N N
63 CEP H10 C H sing 1.09 N N
64 CCP H11 C H sing 1.09 N N
65 CCP H12 C H sing 1.09 N N
66 CAP H13 C H sing 1.09 N N
67 C1B H14 C H sing 1.09 N N
68 C2B H15 C H sing 1.09 N N
69 C3B H16 C H sing 1.09 N N
70 C5B H17 C H sing 1.09 N N
71 C5B H18 C H sing 1.09 N N
72 C2P H19 C H sing 1.09 N N
73 C2P H20 C H sing 1.09 N N
74 C3P H21 C H sing 1.09 N N
75 C7P H22 C H sing 1.09 N N
76 C7P H23 C H sing 1.09 N N
77 C6P H24 C H sing 1.09 N N
78 C6P H25 C H sing 1.09 N N
79 C4B H26 C H sing 1.09 N N
80 OAP H27 O H sing 0.97 N N
81 N8P H28 N H sing 0.97 N N
82 O2B H29 O H sing 0.97 N N
83 C2A H30 C H sing 1.08 N N
84 C8A H31 C H sing 1.08 N N
85 N6A H32 N H sing 0.97 N N
86 N6A H33 N H sing 0.97 N N
87 C1P H34 C H sing 1.09 N N
88 C1P H35 C H sing 1.09 N N
89 CH3 H36 C H sing 1.09 N N
90 CH3 H37 C H sing 1.09 N N
91 CH3 H38 C H sing 1.09 N N
92 C3P H39 C H sing 1.09 N N
93 N4P H40 N H sing 0.97 N N