Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0RD    

Bonds between two atoms of the molecule

Total Number of Bonds: 58


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O13 S1 O S doub 1.4201144 N N
2 C9 C17 C C sing 1.5375663 N N
3 C9 N2 C N sing 1.4652611 N N
4 O12 S1 O S doub 1.4209605 N N
5 S1 N2 S N sing 1.655756 N N
6 S1 C3 S C sing 1.7625413 N N
7 C17 C5 C C sing 1.5125191 N N
8 N2 C4 N C sing 1.3965805 N N
9 C3 C11 C C doub 1.3809631 N Y
10 C3 C18 C C sing 1.3871878 N Y
11 C4 C5 C C doub 1.3869885 N Y
12 C4 C7 C C sing 1.3936478 N Y
13 C5 C10 C C sing 1.3834052 N Y
14 C11 C23 C C sing 1.3846884 N Y
15 O32 C18 O C sing 1.3596576 N N
16 O32 C34 O C sing 1.4287764 N N
17 C18 C22 C C doub 1.3868144 N Y
18 C7 C8 C C doub 1.3930305 N Y
19 C10 C33 C C sing 1.5074687 N N
20 C10 C16 C C doub 1.3798369 N Y
21 C23 CL1 C CL sing 1.7357652 N N
22 C23 C30 C C doub 1.3831099 N Y
23 C22 C30 C C sing 1.3814471 N Y
24 C8 C16 C C sing 1.3956995 N Y
25 C8 C6 C C sing 1.4782324 N N
26 C29 C26 C C doub 1.3764552 N Y
27 C29 C24 C C sing 1.3914499 N Y
28 N14 C6 N C sing 1.3484035 N N
29 N14 C24 N C sing 1.3936807 N N
30 C26 C19 C C sing 1.3981166 N Y
31 C6 O20 C O doub 1.2154727 N N
32 C24 C28 C C doub 1.391538 N Y
33 C19 C15 C C sing 1.4746176 N N
34 C19 C25 C C doub 1.3980393 N Y
35 O21 C15 O C doub 1.215655 N N
36 C28 C25 C C sing 1.3763778 N Y
37 C15 O27 C O sing 1.3476238 N N
38 C11 H1 C H sing 1.0794244 N N
39 C30 H2 C H sing 1.0801852 N N
40 C22 H3 C H sing 1.081216 N N
41 C34 H4 C H sing 1.0903673 N N
42 C34 H5 C H sing 1.0904316 N N
43 C34 H6 C H sing 1.090272 N N
44 C9 H7 C H sing 1.0907584 N N
45 C9 H8 C H sing 1.0897568 N N
46 C17 H9 C H sing 1.0902958 N N
47 C17 H10 C H sing 1.0896467 N N
48 C33 H11 C H sing 1.089476 N N
49 C33 H12 C H sing 1.0897784 N N
50 C33 H13 C H sing 1.0900542 N N
51 C16 H14 C H sing 1.0794915 N N
52 C7 H15 C H sing 1.0802565 N N
53 N14 H16 N H sing 0.969619 N N
54 C28 H17 C H sing 1.079849 N N
55 C25 H18 C H sing 1.0802523 N N
56 C29 H19 C H sing 1.0804805 N N
57 C26 H20 C H sing 1.080286 N N
58 O27 H21 O H sing 0.96676004 N N