Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0QH    

Bonds between two atoms of the molecule

Total Number of Bonds: 74


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.51 N N
2 C1 O C O doub 1.21 N N
3 C2 F1 C F sing 1.4 N N
4 C2 F2 C F sing 1.4 N N
5 C2 F3 C F sing 1.4 N N
6 N CA N C sing 1.46 N N
7 N H N H sing 0.97 N N
8 CA C C C sing 1.51 N N
9 CA CB C C sing 1.53 N N
10 CA HA C H sing 1.09 N N
11 C O1 C O doub 1.21 N N
12 CB CG C C sing 1.53 N N
13 CB HB2 C H sing 1.09 N N
14 CB HB3 C H sing 1.09 N N
15 CG CD1 C C sing 1.53 N N
16 CG CD2 C C sing 1.53 N N
17 CG HG C H sing 1.09 N N
18 CD1 HD11 C H sing 1.09 N N
19 CD1 HD12 C H sing 1.09 N N
20 CD1 HD13 C H sing 1.09 N N
21 CD2 HD21 C H sing 1.09 N N
22 CD2 HD22 C H sing 1.09 N N
23 CD2 HD23 C H sing 1.09 N N
24 N1 N2 N N sing 1.37 N N
25 N1 C3 N C sing 1.47 N N
26 N1 C1M N C sing 1.47 N N
27 N1 CA2 N C sing 1.47 N N
28 N2 HN22 N H sing 0.97 N N
29 C3 C11 C C sing 1.51 N N
30 C3 H1 C H sing 1.09 N N
31 C3 H2A C H sing 1.09 N N
32 C11 C21 C C doub 1.38 N Y
33 C11 C6 C C sing 1.38 N Y
34 C21 C31 C C sing 1.38 N Y
35 C21 H2 C H sing 1.08 N N
36 C31 C4 C C doub 1.38 N Y
37 C31 H3 C H sing 1.08 N N
38 C4 C5 C C sing 1.38 N Y
39 C4 H4 C H sing 1.08 N N
40 C5 C6 C C doub 1.38 N Y
41 C5 H5 C H sing 1.08 N N
42 C6 H6 C H sing 1.08 N N
43 C1M H1M1 C H sing 1.09 N N
44 C1M H1M2 C H sing 1.09 N N
45 C1M H1M3 C H sing 1.09 N N
46 CA2 CA1 C C sing 1.51 N N
47 CA2 HA21 C H sing 1.09 N N
48 CA2 HA22 C H sing 1.09 N N
49 CA1 O2 C O doub 1.21 N N
50 C12 N11 C N sing 1.4 N N
51 C12 C22 C C doub 1.39 N Y
52 C12 C61 C C sing 1.39 N Y
53 N11 HN12 N H sing 0.97 N N
54 C22 C32 C C sing 1.38 N Y
55 C22 H21 C H sing 1.08 N N
56 C32 C41 C C doub 1.38 N Y
57 C32 H31 C H sing 1.08 N N
58 C41 C51 C C sing 1.38 N Y
59 C41 C1' C C sing 1.51 N N
60 C51 C61 C C doub 1.38 N Y
61 C51 H51 C H sing 1.08 N N
62 C61 H61 C H sing 1.08 N N
63 C1' C2' C C sing 1.53 N N
64 C1' C3' C C sing 1.53 N N
65 C1' H1' C H sing 1.09 N N
66 C2' H2'1 C H sing 1.09 N N
67 C2' H2'2 C H sing 1.09 N N
68 C2' H2'3 C H sing 1.09 N N
69 C3' H3'1 C H sing 1.09 N N
70 C3' H3'2 C H sing 1.09 N N
71 C3' H3'3 C H sing 1.09 N N
72 C1 N C N sing 1.35 N N
73 C N2 C N sing 1.35 N N
74 CA1 N11 C N sing 1.35 N N