Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0OR    

Bonds between two atoms of the molecule

Total Number of Bonds: 42


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O40 C39 O C doub 1.21 N N
2 C39 N41 C N sing 1.35 N N
3 C39 C38 C C sing 1.51 N N
4 C38 C37 C C sing 1.53 N N
5 C37 N36 C N sing 1.47 N N
6 O35 C34 O C doub 1.21 N N
7 N36 C34 N C sing 1.35 N N
8 C34 C32 C C sing 1.51 N N
9 C31 C29 C C sing 1.53 N N
10 C32 C29 C C sing 1.53 N N
11 C32 O33 C O sing 1.43 N N
12 C29 C30 C C sing 1.53 N N
13 C29 C28 C C sing 1.53 N N
14 O21 P20 O P doub 1.48 N N
15 O23 P20 O P sing 1.61 N N
16 O23 P24 O P sing 1.61 N N
17 O27 C28 O C sing 1.43 N N
18 O27 P24 O P sing 1.61 N N
19 P20 O19 P O sing 1.61 N N
20 P20 O22 P O sing 1.61 N N
21 P24 O25 P O doub 1.48 N N
22 P24 O26 P O sing 1.61 N N
23 O19 H1 O H sing 0.97 N N
24 O22 H2 O H sing 0.97 N N
25 O26 H3 O H sing 0.97 N N
26 C28 H4 C H sing 1.09 N N
27 C28 H5 C H sing 1.09 N N
28 C30 H6 C H sing 1.09 N N
29 C30 H7 C H sing 1.09 N N
30 C30 H8 C H sing 1.09 N N
31 C31 H9 C H sing 1.09 N N
32 C31 H10 C H sing 1.09 N N
33 C31 H11 C H sing 1.09 N N
34 C32 H12 C H sing 1.09 N N
35 O33 H13 O H sing 0.97 N N
36 N36 H14 N H sing 0.97 N N
37 C37 H15 C H sing 1.09 N N
38 C37 H16 C H sing 1.09 N N
39 C38 H17 C H sing 1.09 N N
40 C38 H18 C H sing 1.09 N N
41 N41 H19 N H sing 0.97 N N
42 N41 H20 N H sing 0.97 N N