Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0DX    

Bonds between two atoms of the molecule

Total Number of Bonds: 133


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 NCA CAA N C sing 1.47 N N
2 CAA HAA C H sing 1.09 N N
3 CAA HAAA C H sing 1.09 N N
4 CAA HAAB C H sing 1.09 N N
5 CAB NCB C N sing 1.47 N N
6 CAB HAB C H sing 1.09 N N
7 CAB HABA C H sing 1.09 N N
8 CAB HABB C H sing 1.09 N N
9 OAE CBQ O C doub 1.21 N N
10 CBR OAF C O doub 1.22 N N
11 CBS OAG C O doub 1.22 N N
12 OAH CBT O C doub 1.22 N N
13 CBP CAI C C doub 1.4 N Y
14 CAI CBU C C sing 1.38 N Y
15 CAI HAI C H sing 1.08 N N
16 CBV CAJ C C doub 1.38 N Y
17 CAJ CBO C C sing 1.4 N Y
18 CAJ HAJ C H sing 1.08 N N
19 CAO CAK C C sing 1.53 N N
20 CAK CAQ C C sing 1.53 N N
21 CAK HAK C H sing 1.09 N N
22 CAK HAKA C H sing 1.09 N N
23 CAR CAL C C sing 1.53 N N
24 CAL CAP C C sing 1.53 N N
25 CAL HAL C H sing 1.09 N N
26 CAL HALA C H sing 1.09 N N
27 CBK CAM C C sing 1.53 N N
28 CAM CAS C C sing 1.53 N N
29 CAM HAM C H sing 1.09 N N
30 CAM HAMA C H sing 1.09 N N
31 CAN CAT C C sing 1.53 N N
32 CAN CBL C C sing 1.53 N N
33 CAN HAN C H sing 1.09 N N
34 CAN HANA C H sing 1.09 N N
35 NBM CAO N C sing 1.47 N N
36 CAO HAO C H sing 1.09 N N
37 CAO HAOA C H sing 1.09 N N
38 CAP NBN C N sing 1.46 N N
39 CAP HAP C H sing 1.09 N N
40 CAP HAPA C H sing 1.09 N N
41 CAQ NCE C N sing 1.47 N N
42 CAQ HAQ C H sing 1.09 N N
43 CAQ HAQA C H sing 1.09 N N
44 NCF CAR N C sing 1.47 N N
45 CAR HAR C H sing 1.09 N N
46 CAR HARA C H sing 1.09 N N
47 CAS NCG C N sing 1.47 N N
48 CAS HAS C H sing 1.09 N N
49 CAS HASA C H sing 1.09 N N
50 NCH CAT N C sing 1.47 N N
51 CAT HAT C H sing 1.09 N N
52 CAT HATA C H sing 1.09 N N
53 CBC CAU C C sing 1.53 N N
54 CAU NCA C N sing 1.47 N N
55 CAU HAU C H sing 1.09 N N
56 CAU HAUA C H sing 1.09 N N
57 CBD CAV C C sing 1.53 N N
58 NCA CAV N C sing 1.47 N N
59 CAV HAV C H sing 1.09 N N
60 CAV HAVA C H sing 1.09 N N
61 NCB CAW N C sing 1.47 N N
62 CAW CBE C C sing 1.53 N N
63 CAW HAW C H sing 1.09 N N
64 CAW HAWA C H sing 1.09 N N
65 CAX NCB C N sing 1.47 N N
66 CAX CBF C C sing 1.53 N N
67 CAX HAX C H sing 1.09 N N
68 CAX HAXA C H sing 1.09 N N
69 CBG CAY C C sing 1.53 N N
70 CAY OCC C O sing 1.43 N N
71 CAY HAY C H sing 1.09 N N
72 CAY HAYA C H sing 1.09 N N
73 CBH CAZ C C sing 1.53 N N
74 CAZ OCC C O sing 1.43 N N
75 CAZ HAZ C H sing 1.09 N N
76 CAZ HAZA C H sing 1.09 N N
77 CBA CBI C C sing 1.53 N N
78 CBA OCD C O sing 1.43 N N
79 CBA HBA C H sing 1.09 N N
80 CBA HBAA C H sing 1.09 N N
81 OCD CBB O C sing 1.43 N N
82 CBB CBJ C C sing 1.53 N N
83 CBB HBB C H sing 1.09 N N
84 CBB HBBA C H sing 1.09 N N
85 CBC NCE C N sing 1.47 N N
86 CBC HBC C H sing 1.09 N N
87 CBC HBCA C H sing 1.09 N N
88 NCE CBD N C sing 1.47 N N
89 CBD HBD C H sing 1.09 N N
90 CBD HBDA C H sing 1.09 N N
91 NCF CBE N C sing 1.47 N N
92 CBE HBE C H sing 1.09 N N
93 CBE HBEA C H sing 1.09 N N
94 CBF NCF C N sing 1.47 N N
95 CBF HBF C H sing 1.09 N N
96 CBF HBFA C H sing 1.09 N N
97 NCG CBG N C sing 1.47 N N
98 CBG HBG C H sing 1.09 N N
99 CBG HBGA C H sing 1.09 N N
100 NCG CBH N C sing 1.47 N N
101 CBH HBH C H sing 1.09 N N
102 CBH HBHA C H sing 1.09 N N
103 CBI NCH C N sing 1.47 N N
104 CBI HBI C H sing 1.09 N N
105 CBI HBIA C H sing 1.09 N N
106 NCH CBJ N C sing 1.47 N N
107 CBJ HBJ C H sing 1.09 N N
108 CBJ HBJA C H sing 1.09 N N
109 NCI CBK N C sing 1.47 N N
110 CBK HBK C H sing 1.09 N N
111 CBK HBKA C H sing 1.09 N N
112 NCJ CBL N C sing 1.47 N N
113 CBL HBL C H sing 1.09 N N
114 CBL HBLA C H sing 1.09 N N
115 CBO NBM C N sing 1.38 N N
116 NBM HNBM N H sing 0.97 N N
117 NBN CBP N C sing 1.38 N N
118 NBN HNBN N H sing 0.97 N N
119 CBW CBO C C doub 1.4 N Y
120 CBP CBX C C sing 1.4 N Y
121 CBU CBQ C C sing 1.48 N N
122 CBQ NCI C N sing 1.35 N N
123 NCJ CBR N C sing 1.35 N N
124 CBR CBV C C sing 1.47 N N
125 NCI CBS N C sing 1.35 N N
126 CBW CBS C C sing 1.47 N N
127 CBT CBX C C sing 1.47 N N
128 CBT NCJ C N sing 1.35 N N
129 CBU CBY C C doub 1.42 N Y
130 CBZ CBV C C sing 1.42 N Y
131 CBY CBW C C sing 1.41 N Y
132 CBX CBZ C C doub 1.41 N Y
133 CBZ CBY C C sing 1.4 N Y