Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : Z9Z

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 100


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O30 O O30 N N N 0 6.307 0.891 1.238
2 C29 C C29 N N N 0 6.052 0.098 0.353
3 O31 O O31 N N N 0 6.933 -0.873 0.045
4 C32 C C32 N N N 0 8.166 -0.912 0.81
5 C33 C C33 N Y N 0 9.02 -2.056 0.328
6 C38 C C38 N Y N 0 9.934 -1.865 -0.691
7 N37 N N37 N Y N 0 10.685 -2.862 -1.118
8 C36 C C36 N Y N 0 10.597 -4.069 -0.597
9 C35 C C35 N Y N 0 9.706 -4.335 0.426
10 C34 C C34 N Y N 0 8.904 -3.311 0.905
11 N28 N N28 N N N 0 4.886 0.187 -0.316
12 C20 C C20 R N N 0 3.925 1.24 0.024
13 C21 C C21 N N N 0 4.286 2.522 -0.729
14 C22 C C22 N Y N 0 5.62 3.029 -0.247
15 C27 C C27 N Y N 0 6.783 2.612 -0.867
16 C26 C C26 N Y N 0 8.007 3.077 -0.424
17 C25 C C25 N Y N 0 8.068 3.959 0.64
18 C24 C C24 N Y N 0 6.905 4.375 1.26
19 C23 C C23 N Y N 0 5.681 3.915 0.812
20 C19 C C19 N N N 0 2.517 0.793 -0.375
21 C18 C C18 N N N 0 2.107 -0.416 0.468
22 C17 C C17 S N N 0 0.699 -0.863 0.069
23 C39 C C39 N N N 0 0.338 -2.145 0.822
24 C40 C C40 N Y N 0 -0.996 -2.652 0.339
25 C45 C C45 N Y N 0 -1.057 -3.534 -0.724
26 C44 C C44 N Y N 0 -2.281 -3.999 -1.167
27 C43 C C43 N Y N 0 -3.444 -3.582 -0.547
28 C42 C C42 N Y N 0 -3.383 -2.7 0.516
29 C41 C C41 N Y N 0 -2.159 -2.24 0.963
30 N16 N N16 N N N 0 -0.261 0.19 0.409
31 C14 C C14 N N N 0 -1.428 0.279 -0.261
32 O15 O O15 N N N 0 -1.682 -0.512 -1.144
33 C13 C C13 R N N 0 -2.416 1.362 0.089
34 C46 C C46 N N N 0 -1.766 2.731 -0.117
35 C48 C C48 N N N 0 -1.456 2.93 -1.602
36 C47 C C47 N N N 0 -2.724 3.827 0.355
37 N12 N N12 N N N 0 -3.594 1.245 -0.775
38 C10 C C10 N N N 0 -4.783 1.727 -0.362
39 O11 O O11 N N N 0 -4.878 2.26 0.728
40 N08 N N08 N N N 0 -5.866 1.62 -1.156
41 C09 C C09 N N N 0 -5.752 0.979 -2.468
42 C07 C C07 N N N 0 -7.158 2.145 -0.707
43 C06 C C06 N Y N 0 -7.907 1.068 0.034
44 N05 N N05 N Y N 0 -8.647 0.164 -0.577
45 C49 C C49 N Y N 0 -7.872 0.947 1.365
46 S50 S S50 N Y N 0 -8.876 -0.43 1.812
47 C04 C C04 N Y N 0 -9.241 -0.709 0.165
48 C02 C C02 N N N 0 -10.126 -1.816 -0.347
49 C03 C C03 N N N 0 -9.542 -3.169 0.065
50 C01 C C01 N N N 0 -11.528 -1.664 0.247
51 H1 H H1 N N N 0 8.705 0.026 0.678
52 H2 H H2 N N N 0 7.933 -1.052 1.866
53 H3 H H3 N N N 0 10.034 -0.89 -1.143
54 H4 H H4 N N N 0 11.229 -4.861 -0.973
55 H5 H H5 N N N 0 9.639 -5.327 0.848
56 H6 H H6 N N N 0 8.198 -3.489 1.704
57 H7 H H7 N N N 0 4.682 -0.446 -1.023
58 H8 H H8 N N N 0 3.956 1.427 1.097
59 H9 H H9 N N N 0 4.341 2.312 -1.798
60 H10 H H10 N N N 0 3.522 3.277 -0.547
61 H11 H H11 N N N 0 6.736 1.923 -1.697
62 H12 H H12 N N N 0 8.916 2.752 -0.908
63 H13 H H13 N N N 0 9.025 4.322 0.986
64 H14 H H14 N N N 0 6.952 5.068 2.087
65 H15 H H15 N N N 0 4.772 4.241 1.297
66 H16 H H16 N N N 0 1.815 1.609 -0.205
67 H17 H H17 N N N 0 2.508 0.52 -1.431
68 H18 H H18 N N N 0 2.809 -1.233 0.298
69 H19 H H19 N N N 0 2.117 -0.143 1.523
70 H20 H H20 N N N 0 0.668 -1.051 -1.004
71 H21 H H21 N N N 0 1.102 -2.901 0.639
72 H22 H H22 N N N 0 0.283 -1.936 1.89
73 H23 H H23 N N N 0 -0.148 -3.86 -1.208
74 H24 H H24 N N N 0 -2.329 -4.688 -1.997
75 H25 H H25 N N N 0 -4.4 -3.945 -0.893
76 H26 H H26 N N N 0 -4.292 -2.374 1.0
77 H27 H H27 N N N 0 -2.111 -1.551 1.793
78 H28 H H28 N N N 0 -0.058 0.823 1.115
79 H29 H H29 N N N 0 -2.718 1.256 1.131
80 H30 H H30 N N N 0 -0.841 2.785 0.457
81 H31 H H31 N N N 0 -2.381 2.876 -2.177
82 H32 H H32 N N N 0 -0.993 3.906 -1.75
83 H33 H H33 N N N 0 -0.774 2.15 -1.939
84 H34 H H34 N N N 0 -2.945 3.685 1.413
85 H35 H H35 N N N 0 -2.261 4.802 0.208
86 H36 H H36 N N N 0 -3.649 3.773 -0.22
87 H37 H H37 N N N 0 -3.518 0.82 -1.643
88 H38 H H38 N N N 0 -5.945 -0.089 -2.369
89 H39 H H39 N N N 0 -6.479 1.418 -3.151
90 H40 H H40 N N N 0 -4.746 1.131 -2.861
91 H41 H H41 N N N 0 -6.995 2.995 -0.045
92 H42 H H42 N N N 0 -7.741 2.463 -1.571
93 H43 H H43 N N N 0 -7.324 1.581 2.046
94 H44 H H44 N N N 0 -10.184 -1.762 -1.434
95 H45 H H45 N N N 0 -9.484 -3.223 1.153
96 H46 H H46 N N N 0 -10.182 -3.969 -0.305
97 H47 H H47 N N N 0 -8.543 -3.277 -0.358
98 H48 H H48 N N N 0 -11.47 -1.718 1.334
99 H49 H H49 N N N 0 -11.944 -0.7 -0.047
100 H50 H H50 N N N 0 -12.168 -2.464 -0.123