Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : X2M

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 32


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C3 C C3 N N N 0 -0.496 1.242 0.435
2 C5 C C5 N N N 0 -0.62 -0.162 0.023
3 C6 C C6 N Y N 0 -2.702 0.817 0.203
4 C7 C C7 N Y N 0 -2.075 -0.396 -0.117
5 C8 C C8 N Y N 0 -2.833 -1.505 -0.476
6 C9 C C9 N Y N 0 -4.209 -1.41 -0.517
7 C10 C C10 N Y N 0 -4.832 -0.214 -0.202
8 C11 C C11 N Y N 0 -4.089 0.894 0.155
9 C19 C C19 N N N 0 0.4 -1.069 -0.189
10 C21 C C21 N Y N 0 1.743 -0.639 -0.163
11 O4 O O4 N N N 0 0.545 1.833 0.658
12 N1 N N1 N N N 0 -1.733 1.761 0.519
13 C26 C C26 N Y N 0 2.832 -1.371 0.285
14 C25 C C25 N Y N 0 3.96 -0.564 0.131
15 C24 C C24 N Y N 0 3.559 0.62 -0.396
16 N22 N N22 N Y N 0 2.215 0.586 -0.584
17 CAB C CAB N N N 0 2.802 -2.774 0.836
18 CAA C CAA N N N 0 4.459 1.783 -0.724
19 H1 H H1 N N N 0 -1.925 2.678 0.773
20 H19 H H19 N N N 0 0.17 -2.108 -0.374
21 H11 H H11 N N N 0 -4.586 1.821 0.398
22 H8 H H8 N N N 0 -2.346 -2.438 -0.722
23 H9 H H9 N N N 0 -4.801 -2.269 -0.795
24 HAB1 H HAB1 N N N 0 2.933 -3.487 0.021
25 H10 H H10 N N N 0 -5.909 -0.146 -0.237
26 H22 H H22 N N N 0 1.677 1.304 -0.952
27 H25 H H25 N N N 0 4.974 -0.834 0.386
28 HAB2 H HAB2 N N N 0 3.608 -2.897 1.559
29 HAB3 H HAB3 N N N 0 1.844 -2.952 1.324
30 HAA1 H HAA1 N N N 0 4.814 1.689 -1.75
31 HAA2 H HAA2 N N N 0 3.905 2.714 -0.615
32 HAA3 H HAA3 N N N 0 5.311 1.785 -0.043