Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VSI

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 49


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C C C N N N 0 2.68 -2.199 0.0020
2 CA C CA N N N 0 4.081 -2.05 -0.533
3 CAA C CAA N Y N 0 4.863 3.159 -0.449
4 CAB C CAB N Y N 0 4.858 2.282 0.645
5 CAC C CAC N Y N 0 4.634 0.919 0.454
6 CAD C CAD N Y N 0 4.416 0.433 -0.826
7 CAE C CAE N Y N 0 4.424 1.324 -1.918
8 CAF C CAF N Y N 0 4.65 2.689 -1.71
9 CAH C CAH N Y N 0 4.032 -0.762 -2.689
10 CAI C CAI N Y N 0 4.168 0.509 -3.105
11 CAN C CAN N N N 0 1.053 -3.454 1.17
12 CAQ C CAQ N N N 0 -1.261 -2.655 1.406
13 CAR C CAR N Y N 0 -2.107 -1.497 0.944
14 CAS C CAS N Y N 0 -2.185 -0.35 1.712
15 CAT C CAT N Y N 0 -2.956 0.717 1.288
16 CAU C CAU N Y N 0 -3.661 0.631 0.094
17 CAV C CAV N Y N 0 -3.584 -0.525 -0.673
18 CAW C CAW N Y N 0 -2.807 -1.585 -0.245
19 CBA C CBA N N N 0 -5.732 1.513 -0.68
20 CBB C CBB N N N 0 -6.607 2.69 -1.024
21 CBD C CBD N N N 0 5.084 2.788 1.966
22 CLX CL CLX N N N 0 -4.463 -0.637 -2.165
23 CLY CL CLY N N N 0 -3.043 2.161 2.247
24 H1 H H1 N N N 0 -7.093 3.058 -0.12
25 H10 H H10 N N N 0 1.411 -5.162 2.093
26 H11 H H11 N N N 0 3.049 -3.886 1.042
27 H12 H H12 N N N 0 4.784 -1.995 0.298
28 H13 H H13 N N N 0 4.324 -2.91 -1.157
29 H14 H H14 N N N 0 4.63 0.246 1.298
30 H15 H H15 N N N 0 5.037 4.213 -0.291
31 H16 H H16 N N N 0 4.655 3.37 -2.548
32 H17 H H17 N N N 0 4.103 0.862 -4.124
33 H18 H H18 N N N 0 3.84 -1.607 -3.333
34 H2 H H2 N N N 0 -5.997 3.483 -1.457
35 H3 H H3 N N N 0 -7.365 2.381 -1.743
36 H4 H H4 N N N 0 -4.056 2.598 -0.392
37 H5 H H5 N N N 0 -2.747 -2.484 -0.841
38 H6 H H6 N N N 0 -1.636 -0.284 2.64
39 H7 H H7 N N N 0 -1.228 -2.669 2.496
40 H8 H H8 N N N 0 -1.694 -3.588 1.044
41 H9 H H9 N N N 0 0.323 -1.747 0.323
42 N N N N Y N 0 4.172 -0.826 -1.332
43 NAL N NAL N N N 0 2.361 -3.259 0.77
44 NAO N NAO N N N 0 0.098 -2.51 0.879
45 NAP N NAP N N N 0 0.725 -4.531 1.824
46 NAZ N NAZ N N N 0 -4.443 1.709 -0.338
47 NBE N NBE N N N 0 5.263 3.189 3.013
48 O O O N N N 0 1.84 -1.364 -0.258
49 OBC O OBC N N N 0 -6.187 0.389 -0.71