Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : T3C

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 54


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C01 N N N 0 8.371 -0.105 1.147
2 C03 C C03 N Y N 0 6.066 0.337 0.393
3 C05 C C05 N Y N 0 4.333 -1.039 0.658
4 C06 C C06 N N N 0 3.668 -2.31 1.121
5 C07 C C07 N Y N 0 3.663 -0.051 0.02
6 C08 C C08 N Y N 0 2.232 -0.052 -0.314
7 C10 C C10 N Y N 0 0.17 -1.09 -0.29
8 C12 C C12 N Y N 0 -1.981 -2.162 -0.137
9 C13 C C13 N Y N 0 -2.654 -3.331 -0.47
10 C14 C C14 N Y N 0 -4.021 -3.31 -0.669
11 C15 C C15 N Y N 0 -4.723 -2.128 -0.538
12 C16 C C16 N Y N 0 -4.056 -0.955 -0.206
13 C18 C C18 N N N 0 -6.132 0.042 -0.315
14 C19 C C19 N N N 0 -6.898 1.383 -0.372
15 C20 C C20 N N N 0 -7.077 1.904 1.031
16 C22 C C22 N N N 0 -4.647 2.384 1.034
17 C23 C C23 N N N 0 -4.46 0.899 1.213
18 C24 C C24 N Y N 0 -2.684 -0.974 0.0010
19 C26 C C26 N Y N 0 0.279 0.993 -1.278
20 C27 C C27 N Y N 0 1.645 1.052 -0.982
21 C28 C C28 N N N 0 2.429 2.193 -1.348
22 H011 H H011 N N N 0 8.071 -0.29 2.179
23 H012 H H012 N N N 0 8.438 -1.052 0.613
24 H013 H H013 N N N 0 9.343 0.389 1.135
25 H02 H H02 N N N 0 7.643 1.616 0.139
26 H061 H H061 N N N 0 3.297 -2.176 2.138
27 H062 H H062 N N N 0 2.836 -2.547 0.459
28 H063 H H063 N N N 0 4.391 -3.125 1.103
29 H11 H H11 N N N 0 -0.176 -2.967 0.452
30 H13 H H13 N N N 0 -2.108 -4.257 -0.573
31 H14 H H14 N N N 0 -4.542 -4.22 -0.928
32 H15 H H15 N N N 0 -5.792 -2.115 -0.694
33 H181 H H181 N N N 0 -6.254 -0.478 -1.265
34 H182 H H182 N N N 0 -6.549 -0.573 0.482
35 H191 H H191 N N N 0 -6.329 2.103 -0.959
36 H192 H H192 N N N 0 -7.874 1.226 -0.83
37 H201 H H201 N N N 0 -8.029 2.431 1.091
38 H202 H H202 N N N 0 -7.103 1.059 1.719
39 H21 H H21 N N N 0 -6.18 3.765 1.134
40 H221 H H221 N N N 0 -4.497 2.637 -0.015
41 H222 H H222 N N N 0 -3.903 2.91 1.634
42 H231 H H231 N N N 0 -5.137 0.533 1.984
43 H232 H H232 N N N 0 -3.429 0.689 1.497
44 H24 H H24 N N N 0 -2.164 -0.065 0.264
45 H26 H H26 N N N 0 -0.206 1.811 -1.79
46 N02 N N02 N N N 0 7.379 0.754 0.497
47 N04 N N04 N Y N 0 5.609 -0.796 0.838
48 N09 N N09 N Y N 0 1.459 -1.088 0.01
49 N11 N N11 N N N 0 -0.598 -2.184 0.064
50 N17 N N17 N N N 0 -4.767 0.24 -0.073
51 N21 N N21 N N N 0 -5.995 2.824 1.448
52 N25 N N25 N Y N 0 -0.41 -0.075 -0.919
53 N29 N N29 N N N 0 3.051 3.099 -1.638
54 S30 S S30 N Y N 0 4.809 1.24 -0.333