Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : S3P

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 27


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -0.284 0.031 2.05
2 C2 C C2 N N N 0 -0.683 -0.029 0.797
3 C3 C C3 R N N 0 0.251 -0.029 -0.376
4 C4 C C4 S N N 0 1.638 0.47 0.048
5 C5 C C5 R N N 0 2.062 -0.299 1.304
6 C6 C C6 N N N 0 1.156 0.117 2.464
7 C7 C C7 N N N 0 -1.307 0.014 3.104
8 O1 O O1 N N N 0 -0.266 0.829 -1.394
9 O2 O O2 N N N 0 1.577 1.868 0.335
10 O3 O O3 N N N 0 1.933 -1.703 1.074
11 O4 O O4 N N N 0 -0.941 0.074 4.4
12 O5 O O5 N N N 0 -2.484 -0.053 2.808
13 P1 P P1 N N N 0 -0.494 -0.082 -2.701
14 O6 O O6 N N N 0 -1.454 -1.163 -2.388
15 O7 O O7 N N N 0 -1.08 0.826 -3.894
16 O8 O O8 N N N 0 0.909 -0.726 -3.157
17 H2 H H2 N N N 0 -1.744 -0.082 0.603
18 H3 H H3 N N N 0 0.338 -1.042 -0.769
19 H4 H H4 N N N 0 2.353 0.291 -0.754
20 H5 H H5 N N N 0 3.098 -0.062 1.546
21 H61 H 1H6 N N N 0 1.327 -0.544 3.313
22 H62 H 2H6 N N N 0 1.388 1.142 2.754
23 HO2 H HO2 N N N 0 2.468 2.138 0.597
24 HO3 H HO3 N N N 0 2.203 -2.147 1.89
25 HO4 H HO4 N N N 0 -1.615 0.063 5.094
26 HO7 H HO7 N N N 0 -1.201 0.243 -4.656
27 HO8 H HO8 N N N 0 1.504 0.009 -3.352