Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : RI8

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 43


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -4.231 -2.928 0.142
2 C11 C C11 N N N 0 -1.467 0.552 -0.072
3 C14 C C14 N Y N 0 0.601 1.731 -0.034
4 C15 C C15 N Y N 0 1.362 0.826 -0.762
5 C16 C C16 N Y N 0 2.747 0.842 -0.653
6 C17 C C17 N Y N 0 3.366 1.762 0.183
7 C18 C C18 N Y N 0 2.606 2.662 0.908
8 C19 C C19 N Y N 0 1.227 2.653 0.798
9 C26 C C26 N N N 0 4.329 -1.572 0.763
10 C27 C C27 N N N 0 5.527 -2.21 1.47
11 C28 C C28 N N N 0 5.048 -2.942 2.725
12 C3 C C3 N Y N 0 -6.003 -1.458 0.076
13 C4 C C4 N Y N 0 -5.093 -0.387 0.0090
14 C5 C C5 N Y N 0 -3.73 -0.672 0.014
15 C8 C C8 N Y N 0 -3.678 1.679 -0.115
16 C9 C C9 N Y N 0 -2.936 0.549 -0.06
17 F21 F F21 N N N 0 0.757 -0.068 -1.574
18 F22 F F22 N N N 0 0.488 3.537 1.503
19 H1 H H1 N N N 0 -3.884 -3.949 0.196
20 H17 H H17 N N N 0 4.442 1.774 0.269
21 H18 H H18 N N N 0 3.09 3.376 1.557
22 H26 H H26 N N N 0 3.846 -0.863 1.435
23 H26A H H26A N N N 0 3.618 -2.348 0.482
24 H27 H H27 N N N 0 6.01 -2.919 0.798
25 H27A H H27A N N N 0 6.238 -1.433 1.752
26 H28 H H28 N N N 0 4.565 -2.233 3.397
27 H28A H H28A N N N 0 4.337 -3.718 2.444
28 H28B H H28B N N N 0 5.901 -3.396 3.229
29 H8 H H8 N N N 0 -3.261 2.674 -0.173
30 HN10 H HN10 N N N 0 -7.988 -1.967 0.12
31 HN13 H HN13 N N N 0 -1.28 2.55 -0.266
32 HN1A H HN1A N N N 0 -7.704 -0.314 0.027
33 HN20 H HN20 N N N 0 3.244 -0.328 -2.278
34 N10 N N10 N N N 0 -7.368 -1.223 0.074
35 N13 N N13 N N N 0 -0.796 1.719 -0.141
36 N2 N N2 N Y N 0 -5.531 -2.696 0.14
37 N20 N N20 N N N 0 3.518 -0.069 -1.385
38 N6 N N6 N Y N 0 -3.347 -1.962 0.087
39 O12 O O12 N N N 0 -0.856 -0.499 -0.019
40 O24 O O24 N N N 0 5.357 -1.632 -1.699
41 O25 O O25 N N N 0 5.674 0.433 -0.373
42 S23 S S23 N N N 0 4.898 -0.704 -0.725
43 S7 S S7 N Y N 0 -5.346 1.347 -0.083