Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : MT8

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 31


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 -2.03 0.692 0.067
2 O1 O O1 N N N 0 -2.565 0.937 -1.236
3 C2 C C2 N N N 0 -1.263 1.928 0.536
4 C3 C C3 N N N 0 -0.0010 2.08 -0.323
5 C6 C C6 N N N 0 -3.178 0.411 1.039
6 N7 N N7 N N N 0 0.844 0.901 -0.094
7 C8 C C8 N N N 0 2.164 1.056 0.109
8 O8 O O8 N N N 0 2.662 2.155 -0.01
9 C9 C C9 N N N 0 3.03 -0.115 0.483
10 C10 C C10 N N N 0 2.557 -1.367 -0.252
11 C11 C C11 N Y N 0 1.062 -1.501 -0.132
12 C12 C C12 N Y N 0 0.493 -2.759 -0.085
13 C13 C C13 N Y N 0 -0.88 -2.894 0.01
14 C14 C C14 N Y N 0 -1.683 -1.771 0.056
15 C15 C C15 N Y N 0 0.257 -0.369 -0.072
16 C20 C C20 N Y N 0 -1.121 -0.507 0.013
17 HO1 H HO1 N N N 0 -3.175 1.686 -1.276
18 H2 H H2 N N N 0 -1.89 2.812 0.425
19 H2A H H2A N N N 0 -0.98 1.806 1.582
20 H3 H H3 N N N 0 -0.277 2.137 -1.376
21 H3A H H3A N N N 0 0.537 2.982 -0.032
22 H6 H H6 N N N 0 -3.734 -0.464 0.702
23 H6A H H6A N N N 0 -2.774 0.224 2.034
24 H6B H H6B N N N 0 -3.844 1.273 1.073
25 H9 H H9 N N N 0 4.064 0.097 0.208
26 H9A H H9A N N N 0 2.97 -0.282 1.558
27 H10 H H10 N N N 0 2.831 -1.294 -1.305
28 H10A H H10A N N N 0 3.035 -2.245 0.184
29 H12 H H12 N N N 0 1.12 -3.637 -0.123
30 H13 H H13 N N N 0 -1.324 -3.878 0.049
31 H14 H H14 N N N 0 -2.755 -1.881 0.125