Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : L6C

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 0.423 -3.742 -0.287
2 C2 C C2 N N N 0 0.414 -2.653 0.233
3 C3 C C3 N N N 0 1.702 -1.891 0.411
4 C4 C C4 R N N 0 1.571 -0.509 -0.231
5 C12 C C12 N Y N 0 2.896 0.205 -0.161
6 C17 C C17 N Y N 0 3.721 0.241 -1.27
7 C16 C C16 N Y N 0 4.937 0.896 -1.206
8 C15 C C15 N Y N 0 5.327 1.516 -0.033
9 C14 C C14 N Y N 0 4.501 1.481 1.075
10 C13 C C13 N Y N 0 3.284 0.83 1.009
11 N1 N N1 N N N 0 0.558 0.269 0.487
12 C5 C C5 N N N 0 -0.744 0.139 0.167
13 O2 O O2 N N N 0 -1.079 -0.624 -0.718
14 O3 O O3 N N N 0 -1.675 0.854 0.827
15 C6 C C6 N Y N 0 -2.957 0.754 0.387
16 C7 C C7 N Y N 0 -3.712 -0.369 0.695
17 C8 C C8 N Y N 0 -5.015 -0.468 0.247
18 C9 C C9 N Y N 0 -5.567 0.55 -0.508
19 C10 C C10 N Y N 0 -4.817 1.67 -0.817
20 C11 C C11 N Y N 0 -3.515 1.776 -0.366
21 H31C H H31C N N N 0 1.914 -1.78 1.475
22 H32C H H32C N N N 0 2.516 -2.438 -0.065
23 HXT H HXT N N N 0 -0.518 -2.222 0.567
24 H4 H H4 N N N 0 1.272 -0.62 -1.273
25 H1 H H1 N N N 0 0.826 0.878 1.194
26 H17 H H17 N N N 0 3.417 -0.244 -2.185
27 H13 H H13 N N N 0 2.637 0.806 1.874
28 H16 H H16 N N N 0 5.582 0.923 -2.071
29 H15 H H15 N N N 0 6.277 2.027 0.017
30 H14 H H14 N N N 0 4.806 1.965 1.991
31 H7 H H7 N N N 0 -3.28 -1.165 1.284
32 H11 H H11 N N N 0 -2.931 2.654 -0.603
33 H8 H H8 N N N 0 -5.602 -1.342 0.486
34 H9 H H9 N N N 0 -6.585 0.47 -0.858
35 H10 H H10 N N N 0 -5.25 2.463 -1.407