Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : DZY

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 20


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -0.097 0.0060 -0.549
2 C3 C C3 N Y N 0 0.449 -1.143 -0.139
3 C4 C C4 N N N 0 -1.522 0.105 -1.028
4 C5 C C5 N Y N 0 1.911 0.836 -0.071
5 C7 C C7 N N N 0 -0.238 -2.483 -0.088
6 C8 C C8 N N N 0 -2.425 0.408 0.139
7 C9 C C9 N N N 0 2.978 1.893 0.058
8 H1 H H1 N N N 0 -4.286 0.737 0.728
9 H2 H H2 N N N 0 -1.82 -0.84 -1.482
10 H3 H H3 N N N 0 -1.602 0.903 -1.767
11 H4 H H4 N N N 0 -0.094 -3.001 -1.036
12 H5 H H5 N N N 0 0.187 -3.079 0.72
13 H6 H H6 N N N 0 -1.304 -2.338 0.089
14 H7 H H7 N N N 0 3.892 1.442 0.444
15 H8 H H8 N N N 0 3.174 2.332 -0.92
16 H9 H H9 N N N 0 2.638 2.67 0.743
17 N2 N N2 N Y N 0 0.714 1.043 -0.505
18 O10 O O10 N N N 0 -1.959 0.531 1.247
19 O11 O O11 N N N 0 -3.747 0.542 -0.051
20 S6 S S6 N Y N 0 2.115 -0.813 0.331