Chemical Components in the PDB

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  • LXC (Stereoisomer)
  • XYP (Stereoisomer)
  • HSY (Stereoisomer)
  • 0MK (Stereoisomer)
  • LDY (Stereoisomer)
  • ARB (Stereoisomer)
  • RIP (Stereoisomer)
  • XYS (Stereoisomer)
  • 64K (Stereoisomer)

PDBeChem : Atoms of Molecule

 Molecule : ARA

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 20


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 0.316 -0.253 1.356
2 C2 C C2 R N N 0 -0.817 0.217 0.443
3 C3 C C3 S N N 0 -0.716 -0.517 -0.9
4 C4 C C4 S N N 0 0.697 -0.321 -1.458
5 C5 C C5 N N N 0 1.716 -0.751 -0.401
6 O1 O O1 N N Y 0 0.21 0.403 2.621
7 O2 O O2 N N N 0 -2.076 -0.073 1.055
8 O3 O O3 N N N 0 -1.677 0.018 -1.813
9 O4 O O4 N N N 0 0.896 1.056 -1.782
10 O5 O O5 N N N 0 1.575 0.058 0.764
11 H1 H H1 N N N 0 0.241 -1.331 1.501
12 H2 H H2 N N N 0 -0.731 1.291 0.278
13 H3 H H3 N N N 0 -0.907 -1.58 -0.751
14 H4 H H4 N N N 0 0.823 -0.928 -2.354
15 H51 H 1H5 N N N 0 1.548 -1.795 -0.139
16 H52 H 2H5 N N N 0 2.724 -0.637 -0.801
17 HO1 H HO1 N N N 0 0.938 0.077 3.167
18 HO2 H HO2 N N N 0 -2.094 0.402 1.896
19 HO3 H HO3 N N N 0 -1.578 -0.471 -2.641
20 HO4 H HO4 N N N 0 1.796 1.135 -2.126