Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 799

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 62


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C2 C C1 N N N 0 -6.992 1.465 -1.159
2 C4 C C2 N N N 0 -7.029 0.846 0.214
3 C5 C C3 N N N 0 -7.103 1.951 1.27
4 C6 C C4 N N N 0 -8.259 -0.057 0.333
5 C8 C C5 N Y N 0 -4.56 0.43 0.12
6 C12 C C6 N Y N 0 -2.249 -0.611 0.308
7 C16 C C7 N N N 0 1.115 -3.752 0.095
8 C17 C C8 N N N 0 1.706 -3.076 -1.145
9 C19 C C9 N Y N 0 3.844 -1.728 -0.816
10 C23 C C10 N Y N 0 0.496 -0.643 -0.022
11 C24 C C11 N Y N 0 -0.228 0.475 -0.409
12 C32 C C12 N N N 0 4.681 2.395 0.695
13 C33 C C13 N N N 0 4.982 2.751 2.151
14 C34 C C14 N N N 0 4.752 3.658 -0.165
15 N1 N N1 N N N 0 -8.009 2.245 -1.574
16 O3 O O1 N N N 0 -6.043 1.266 -1.888
17 N7 N N2 N Y N 0 -5.817 0.051 0.424
18 C9 C C15 N Y N 0 -3.725 -0.593 0.465
19 C10 C C16 N Y N 0 -4.518 -1.627 0.998
20 N11 N N3 N Y N 0 -5.765 -1.235 0.977
21 C13 C C17 N Y N 0 -1.524 -1.733 0.707
22 C14 C C18 N Y N 0 -0.153 -1.75 0.561
23 O15 O O2 N N N 0 0.604 -2.779 1.005
24 N18 N N4 N Y N 0 2.502 -1.914 -0.754
25 C20 C C19 N Y N 0 4.09 -0.468 -0.351
26 N21 N N5 N Y N 0 2.909 0.093 -0.01
27 C22 C C20 N Y N 0 1.954 -0.761 -0.24
28 C25 C C21 N Y N 0 -1.597 0.491 -0.245
29 C26 C C22 N Y N 0 5.419 0.172 -0.24
30 N27 N N6 N Y N 0 6.573 -0.371 -0.572
31 C28 C C23 N Y N 0 7.559 0.491 -0.338
32 C29 C C24 N N N 0 9.022 0.234 -0.592
33 N30 N N7 N Y N 0 7.058 1.598 0.145
34 N31 N N8 N Y N 0 5.666 1.422 0.216
35 H1 H H1 N N N 0 -8.005 2.543 1.114
36 H2 H H2 N N N 0 -7.13 1.503 2.264
37 H3 H H3 N N N 0 -6.227 2.594 1.186
38 H4 H H4 N N N 0 -8.206 -0.844 -0.419
39 H5 H H5 N N N 0 -8.286 -0.505 1.327
40 H6 H H6 N N N 0 -9.16 0.535 0.177
41 H7 H H7 N N N 0 -4.267 1.372 -0.321
42 H8 H H8 N N N 0 0.307 -4.418 -0.21
43 H9 H H9 N N N 0 1.892 -4.334 0.59
44 H10 H H10 N N N 0 2.34 -3.787 -1.676
45 H11 H H11 N N N 0 0.897 -2.753 -1.801
46 H12 H H12 N N N 0 4.577 -2.44 -1.165
47 H13 H H13 N N N 0 0.279 1.33 -0.832
48 H14 H H14 N N N 0 3.682 1.964 0.625
49 H15 H H15 N N N 0 4.249 3.475 2.508
50 H16 H H16 N N N 0 4.932 1.851 2.764
51 H17 H H17 N N N 0 5.981 3.182 2.221
52 H18 H H18 N N N 0 4.018 4.382 0.191
53 H19 H H19 N N N 0 5.75 4.089 -0.096
54 H20 H H20 N N N 0 4.537 3.404 -1.203
55 H21 H H21 N N N 0 -8.766 2.408 -0.989
56 H22 H H22 N N N 0 -7.985 2.644 -2.458
57 H23 H H23 N N N 0 -4.159 -2.578 1.365
58 H24 H H24 N N N 0 -2.034 -2.586 1.131
59 H25 H H25 N N N 0 -2.165 1.359 -0.545
60 H26 H H26 N N N 0 9.275 0.543 -1.606
61 H27 H H27 N N N 0 9.62 0.802 0.121
62 H28 H H28 N N N 0 9.23 -0.83 -0.474