Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : 5ME

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 42


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAJ C CAJ N Y N 0 6.095 -0.321 -0.583
2 CAF C CAF N Y N 0 7.033 0.647 -0.906
3 CAE C CAE N Y N 0 6.726 1.975 -0.65
4 CAI C CAI N Y N 0 5.503 2.286 -0.086
5 NAO N NAO N Y N 0 4.635 1.339 0.208
6 CAU C CAU N Y N 0 4.891 0.066 -0.026
7 CAY C CAY R N N 0 3.864 -0.978 0.329
8 CAA C CAA N N N 0 4.172 -1.546 1.716
9 NAQ N NAQ N N N 0 2.531 -0.37 0.336
10 CAS C CAS N N N 0 1.441 -1.133 0.124
11 OAC O OAC N N N 0 1.563 -2.323 -0.073
12 CAM C CAM N N N 0 0.07 -0.507 0.131
13 CAN C CAN N N N 0 -0.984 -1.585 -0.133
14 CAT C CAT N N N 0 -2.355 -0.959 -0.126
15 NAP N NAP N N N 0 -2.448 0.318 0.088
16 CAW C CAW N Y N 0 -3.648 0.95 0.108
17 CAK C CAK N Y N 0 -3.748 2.324 0.338
18 CAG C CAG N Y N 0 -4.987 2.924 0.35
19 CAH C CAH N Y N 0 -6.141 2.181 0.136
20 CAL C CAL N Y N 0 -6.067 0.824 -0.092
21 CAX C CAX N Y N 0 -4.823 0.197 -0.109
22 CAV C CAV N N N 0 -4.682 -1.247 -0.348
23 OAD O OAD N N N 0 -5.655 -1.954 -0.541
24 NAR N NAR N N N 0 -3.43 -1.76 -0.349
25 H1 H H1 N N N 0 6.301 -1.365 -0.768
26 H2 H H2 N N N 0 7.981 0.374 -1.346
27 H3 H H3 N N N 0 7.433 2.756 -0.889
28 H4 H H4 N N N 0 5.258 3.318 0.121
29 H5 H H5 N N N 0 3.893 -1.781 -0.407
30 H6 H H6 N N N 0 3.43 -2.301 1.973
31 H7 H H7 N N N 0 5.164 -1.998 1.711
32 H8 H H8 N N N 0 4.143 -0.742 2.452
33 H9 H H9 N N N 0 2.433 0.583 0.493
34 H10 H H10 N N N 0 -0.115 -0.048 1.102
35 H11 H H11 N N N 0 0.014 0.254 -0.648
36 H12 H H12 N N N 0 -0.799 -2.044 -1.104
37 H13 H H13 N N N 0 -0.928 -2.346 0.646
38 H15 H H15 N N N 0 -2.859 2.913 0.506
39 H16 H H16 N N N 0 -5.063 3.987 0.529
40 H17 H H17 N N N 0 -7.103 2.67 0.15
41 H18 H H18 N N N 0 -6.967 0.25 -0.257
42 H14 H H14 N N N 0 -3.299 -2.708 -0.503