Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 5GZ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 50


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CL CL CL N N N 0 4.792 1.761 0.835
2 O01 O O01 N N N 0 -2.31 2.68 1.538
3 S02 S S02 N N N 0 -2.192 2.677 0.121
4 C03 C C03 N Y N 0 -0.617 1.979 -0.245
5 C04 C C04 N Y N 0 0.003 2.267 -1.447
6 C05 C C05 N Y N 0 1.238 1.72 -1.738
7 O09 O O09 N N N 0 3.071 0.341 -1.105
8 C06 C C06 N Y N 0 0.0 1.147 0.671
9 C07 C C07 N Y N 0 1.235 0.599 0.387
10 C08 C C08 N Y N 0 1.857 0.881 -0.822
11 C10 C C10 N Y N 0 3.639 -0.475 -0.178
12 C11 C C11 N Y N 0 3.39 -1.839 -0.208
13 N12 N N12 N N N 1 2.507 -2.408 -1.25
14 O13 O O13 N N N -1 2.289 -3.606 -1.276
15 O14 O O14 N N N 0 1.997 -1.678 -2.082
16 C15 C C15 N Y N 0 3.969 -2.666 0.735
17 C16 C C16 N Y N 0 4.795 -2.136 1.709
18 C17 C C17 N Y N 0 5.045 -0.776 1.742
19 C18 C C18 N Y N 0 4.473 0.055 0.798
20 N20 N N20 N N N 0 -3.339 1.623 -0.441
21 C21 C C21 N N N 0 -3.462 0.29 0.152
22 C22 C C22 N N N 0 -4.796 -0.333 -0.266
23 N23 N N23 N N N 0 -4.919 -1.67 0.329
24 C24 C C24 N N N 0 -6.277 -2.203 0.15
25 C25 C C25 N N N 0 -7.228 -1.515 1.132
26 C26 C C26 N N N 0 -3.916 -2.588 -0.227
27 C27 C C27 N N N 0 -3.802 -3.823 0.67
28 O28 O O28 N N N 0 -2.304 3.852 -0.67
29 H04 H H04 N N N 0 -0.479 2.92 -2.16
30 H05 H H05 N N N 0 1.722 1.945 -2.677
31 H06 H H06 N N N 0 -0.484 0.927 1.611
32 H07 H H07 N N N 0 1.717 -0.05 1.103
33 H15 H H15 N N N 0 3.776 -3.729 0.712
34 H16 H H16 N N N 0 5.246 -2.785 2.445
35 H17 H H17 N N N 0 5.69 -0.365 2.503
36 HN20 H HN20 N N N 0 -3.929 1.889 -1.164
37 H21 H H21 N N N 0 -2.643 -0.34 -0.196
38 H21A H H21A N N N 0 -3.423 0.37 1.238
39 H22 H H22 N N N 0 -5.615 0.296 0.082
40 H22A H H22A N N N 0 -4.835 -0.413 -1.352
41 H24 H H24 N N N 0 -6.609 -2.014 -0.871
42 H24A H H24A N N N 0 -6.274 -3.276 0.339
43 H25 H H25 N N N 0 -8.213 -1.978 1.068
44 H25A H H25A N N N 0 -6.842 -1.621 2.146
45 H25B H H25B N N N 0 -7.306 -0.457 0.881
46 H26 H H26 N N N 0 -4.219 -2.894 -1.228
47 H26A H H26A N N N 0 -2.951 -2.085 -0.276
48 H27 H H27 N N N 0 -3.486 -3.519 1.668
49 H27A H H27A N N N 0 -4.771 -4.318 0.732
50 H27B H H27B N N N 0 -3.069 -4.511 0.25