Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : 2V8

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 48


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CL1 CL CL1 N N N 0 0.192 4.126 -2.328
2 C2 C C2 N Y N 0 0.133 3.126 -0.909
3 C3 C C3 N Y N 0 0.291 1.758 -1.022
4 C5 C C5 N Y N 0 0.243 0.96 0.113
5 C6 C C6 N Y N 0 0.036 1.539 1.358
6 C7 C C7 N Y N 0 -0.121 2.907 1.464
7 C9 C C9 N Y N 0 -0.067 3.701 0.333
8 C11 C C11 N N N 0 -0.017 0.676 2.592
9 N15 N N15 N Y N 0 0.403 -0.427 0.0030
10 C16 C C16 N Y N 0 1.585 -1.116 0.066
11 N17 N N17 N Y N 0 1.346 -2.397 -0.077
12 C18 C C18 N Y N 0 0.023 -2.592 -0.236
13 C19 C C19 N Y N 0 -0.596 -1.348 -0.183
14 C20 C C20 N Y N 0 -2.04 -1.072 -0.31
15 C21 C C21 N Y N 0 -2.664 -0.182 0.567
16 C23 C C23 N Y N 0 -4.015 0.071 0.442
17 C24 C C24 N Y N 0 -4.751 -0.554 -0.551
18 C26 C C26 N Y N 0 -4.138 -1.436 -1.423
19 C28 C C28 N Y N 0 -2.787 -1.694 -1.313
20 CL2 CL CL2 N N N 0 -4.794 1.176 1.532
21 C31 C C31 N N N 0 -0.647 -3.887 -0.427
22 O32 O O32 N N N 0 0.078 -5.023 -0.453
23 O33 O O33 N N N 0 -1.854 -3.933 -0.561
24 C35 C C35 N Y N 0 2.919 -0.511 0.264
25 C36 C C36 N Y N 0 4.071 -1.252 -0.0020
26 C38 C C38 N Y N 0 5.313 -0.68 0.185
27 C39 C C39 N Y N 0 5.418 0.624 0.634
28 C41 C C41 N Y N 0 4.279 1.364 0.9
29 C43 C C43 N Y N 0 3.032 0.807 0.712
30 C45 C C45 N N N 0 6.559 -1.479 -0.102
31 H1 H H1 N N N 0 0.451 1.31 -1.991
32 H2 H H2 N N N 0 -0.282 3.358 2.433
33 H3 H H3 N N N 0 -0.186 4.771 0.42
34 H4 H H4 N N N 0 0.986 0.575 3.009
35 H5 H H5 N N N 0 -0.672 1.138 3.331
36 H6 H H6 N N N 0 -0.402 -0.309 2.33
37 H7 H H7 N N N 0 -2.092 0.305 1.342
38 H8 H H8 N N N 0 -5.808 -0.353 -0.645
39 H9 H H9 N N N 0 -4.718 -1.92 -2.195
40 H10 H H10 N N N 0 -2.31 -2.38 -1.997
41 H11 H H11 N N N 0 -0.407 -5.85 -0.58
42 H12 H H12 N N N 0 3.991 -2.27 -0.352
43 H13 H H13 N N N 0 6.392 1.066 0.779
44 H14 H H14 N N N 0 4.368 2.381 1.251
45 H15 H H15 N N N 0 2.144 1.387 0.915
46 H16 H H16 N N N 0 6.851 -1.337 -1.142
47 H17 H H17 N N N 0 7.364 -1.143 0.551
48 H18 H H18 N N N 0 6.362 -2.536 0.079