Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 2H5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 23


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C2 C C2 S N N 0 -1.501 -0.35 0.137
2 C6 C C6 N N N 0 2.678 0.542 0.011
3 C3 C C3 S N N 0 -1.105 0.947 -0.574
4 C4 C C4 S N N 0 0.314 1.337 -0.147
5 C5 C C5 R N N 0 1.269 0.185 -0.467
6 C1 C C1 R N N 0 -0.476 -1.438 -0.192
7 O1 O O1 N N N 0 -0.809 -2.636 0.514
8 O2 O O2 N N N 0 -2.795 -0.762 -0.308
9 F3 F F3 N N N 0 -1.996 1.966 -0.22
10 O4 O O4 N N N 0 0.335 1.6 1.257
11 O5 O O5 N N N 0 0.826 -0.999 0.201
12 O6 O O6 N N N 0 3.591 -0.481 -0.39
13 H1 H H1 N N N 0 -1.523 -0.183 1.214
14 H2 H H2 N N N 0 2.981 1.492 -0.429
15 H3 H H3 N N N 0 2.682 0.628 1.098
16 H4 H H4 N N N 0 -1.134 0.796 -1.653
17 H5 H H5 N N N 0 0.625 2.23 -0.69
18 H6 H H6 N N N 0 1.283 0.012 -1.543
19 H7 H H7 N N N 0 -0.485 -1.634 -1.264
20 H8 H H8 N N N 0 -0.2 -3.369 0.352
21 H9 H H9 N N N 0 -3.109 -1.581 0.1
22 H10 H H10 N N N 0 -0.252 2.318 1.532
23 H11 H H11 N N N 0 4.506 -0.32 -0.12