Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 27O

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 43


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C4 N Y N 0 -0.921 -1.338 -0.489
2 C5 C C5 N Y N 0 0.465 -1.258 -0.363
3 C6 C C6 N Y N 0 1.08 -0.064 -0.143
4 C7 C C7 N N N 0 2.58 0.0010 -0.01
5 C8 C C8 N N N 0 3.23 -0.632 -1.242
6 C10 C C10 N N N 0 5.186 -1.327 0.148
7 C13 C C13 N Y N 0 0.31 1.107 -0.042
8 C15 C C15 N Y N 0 0.132 3.47 0.284
9 C17 C C17 N Y N 0 -1.869 2.197 -0.071
10 O1 O O1 N N N 0 -3.016 -1.554 1.459
11 C2 C C2 N N N 0 -3.756 -1.122 0.606
12 O O O N N N 0 -5.077 -1.347 0.687
13 C1 C C1 R N N 0 -3.194 -0.332 -0.548
14 C C C N N N 0 -3.53 -1.039 -1.862
15 C3 C C3 N Y N 0 -1.698 -0.224 -0.402
16 C18 C C18 N Y N 0 -1.099 1.026 -0.171
17 C16 C C16 N Y N 0 -1.254 3.389 0.157
18 C14 C C14 N Y N 0 0.91 2.357 0.188
19 C12 C C12 N N N 0 3.014 -0.76 1.244
20 C11 C C11 N N N 0 4.536 -0.694 1.38
21 C9 C C9 N N N 0 4.753 -0.566 -1.106
22 H1 H H1 N N N 0 -1.385 -2.298 -0.663
23 H2 H H2 N N N 0 1.059 -2.156 -0.44
24 H3 H H3 N N N 0 2.892 1.042 0.071
25 H4 H H4 N N N 0 2.918 -1.673 -1.322
26 H5 H H5 N N N 0 6.271 -1.28 0.245
27 H6 H H6 N N N 0 4.874 -2.368 0.068
28 H7 H H7 N N N 0 0.595 4.429 0.465
29 H8 H H8 N N N 0 -2.943 2.15 -0.167
30 H9 H H9 N N N 0 -5.39 -1.859 1.445
31 H10 H H10 N N N 0 -3.632 0.667 -0.55
32 H11 H H11 N N N 0 -4.612 -1.117 -1.967
33 H12 H H12 N N N 0 -3.124 -0.467 -2.696
34 H13 H H13 N N N 0 -3.093 -2.038 -1.859
35 H14 H H14 N N N 0 -1.848 4.288 0.238
36 H15 H H15 N N N 0 1.982 2.434 0.289
37 H16 H H16 N N N 0 2.551 -0.309 2.122
38 H17 H H17 N N N 0 2.701 -1.801 1.163
39 H18 H H18 N N N 0 4.846 -1.236 2.273
40 H19 H H19 N N N 0 4.849 0.347 1.461
41 H20 H H20 N N N 0 5.216 -1.017 -1.983
42 H21 H H21 N N N 0 2.921 -0.09 -2.135
43 H22 H H22 N N N 0 5.065 0.475 -1.025