Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 21C

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 46


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C13 C C13 N N N 0 -3.995 -0.69 0.034
2 C17 C C17 N N N 0 -5.428 2.282 0.065
3 C20 C C20 N N N 0 -3.574 -2.123 -0.299
4 C21 C C21 N N N 0 -2.477 -2.568 0.673
5 CL1 CL CL1 N N N 0 7.269 1.466 -0.29
6 C02 C C02 N Y N 0 5.801 0.547 -0.182
7 C03 C C03 N Y N 0 4.602 1.189 0.074
8 CL2 CL CL2 N N N 0 4.569 2.911 0.287
9 C05 C C05 N Y N 0 3.429 0.46 0.161
10 C06 C C06 N Y N 0 3.454 -0.916 -0.0090
11 N07 N N07 N N N 0 2.268 -1.656 0.078
12 C08 C C08 N N N 0 0.999 -0.976 0.349
13 C09 C C09 N N N 0 -0.115 -1.99 0.392
14 N10 N N10 N N N 0 -1.38 -1.591 0.628
15 C11 C C11 N N N 0 -1.69 -0.171 0.845
16 C12 C C12 N N N 0 -2.796 0.247 -0.129
17 N14 N N14 N N N 0 -5.067 -0.272 -0.872
18 S15 S S15 N N N 0 -6.272 0.725 -0.327
19 O16 O O16 N N N 0 -6.736 0.096 0.86
20 C18 C C18 N N N 0 -6.447 3.297 0.586
21 O19 O O19 N N N 0 -7.126 0.889 -1.45
22 O22 O O22 N N N 0 0.127 -3.165 0.214
23 C23 C C23 N Y N 0 4.662 -1.562 -0.267
24 O24 O O24 N N N 0 4.691 -2.911 -0.435
25 C25 C C25 N Y N 0 5.831 -0.826 -0.359
26 H131 H H131 N N N 0 -4.352 -0.646 1.063
27 H171 H H171 N N N 0 -4.671 2.103 0.829
28 H172 H H172 N N N 0 -4.952 2.673 -0.834
29 H201 H H201 N N N 0 -4.434 -2.786 -0.205
30 H202 H H202 N N N 0 -3.194 -2.162 -1.32
31 H211 H H211 N N N 0 -2.882 -2.616 1.684
32 H212 H H212 N N N 0 -2.105 -3.549 0.379
33 H051 H H051 N N N 0 2.494 0.962 0.361
34 H071 H H071 N N N 0 2.287 -2.618 -0.041
35 H081 H H081 N N N 0 1.06 -0.462 1.308
36 H082 H H082 N N N 0 0.8 -0.251 -0.44
37 H111 H H111 N N N 0 -2.031 -0.024 1.87
38 H112 H H112 N N N 0 -0.798 0.428 0.665
39 H121 H H121 N N N 0 -2.422 0.185 -1.151
40 H122 H H122 N N N 0 -3.102 1.271 0.086
41 H141 H H141 N N N 0 -5.071 -0.58 -1.792
42 H182 H H182 N N N 0 -7.204 3.476 -0.178
43 H183 H H183 N N N 0 -6.923 2.906 1.485
44 H2 H H2 N N Y 0 -5.94 4.233 0.821
45 H241 H H241 N N N 0 4.57 -3.196 -1.352
46 H251 H H251 N N N 0 6.767 -1.323 -0.563