Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : 20M

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 62


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 0.266 0.25 -1.365
2 C2 C C2 N Y N 0 -1.003 0.798 -1.377
3 C3 C C3 N Y N 0 -1.609 1.164 -0.19
4 C4 C C4 N Y N 0 -0.946 0.982 1.009
5 C5 C C5 N Y N 0 0.323 0.433 1.021
6 C6 C C6 N Y N 0 0.929 0.068 -0.166
7 C7 C C7 N N N 0 2.31 -0.535 -0.153
8 N8 N N8 N N N 0 3.31 0.53 -0.262
9 C9 C C9 N N N 0 4.645 0.219 -0.271
10 N10 N N10 N N N 0 4.985 -1.031 -0.18
11 C11 C C11 N Y N 0 6.239 -1.537 -0.122
12 C12 C C12 N Y N 0 6.484 -2.908 -0.277
13 C13 C C13 N Y N 0 7.784 -3.36 -0.213
14 N14 N N14 N Y N 0 8.793 -2.533 -0.0050
15 C15 C C15 N Y N 0 8.608 -1.231 0.16
16 C16 C C16 N Y N 0 7.346 -0.707 0.116
17 S17 S S17 N N N 0 7.035 1.015 0.361
18 O18 O O18 N N N 0 6.84 1.208 1.756
19 O19 O O19 N N N 0 7.998 1.725 -0.405
20 N20 N N20 N N N 0 5.552 1.249 -0.381
21 S21 S S21 N N N 0 -3.226 1.864 -0.205
22 O22 O O22 N N N 0 -3.348 2.617 0.994
23 O23 O O23 N N N 0 -3.408 2.425 -1.498
24 N24 N N24 N N N 0 -4.303 0.612 -0.083
25 C25 C C25 N N N 0 -4.815 -0.055 -1.288
26 C26 C C26 N N N 0 -6.346 -0.051 -1.241
27 C27 C C27 N N N 0 -6.813 -0.682 0.073
28 C28 C C28 N N N 0 -6.291 0.144 1.251
29 C29 C C29 N N N 0 -4.759 0.143 1.232
30 N30 N N30 N N N 0 -8.281 -0.71 0.108
31 C31 C C31 N N N 0 -8.819 -1.563 -0.968
32 C32 C C32 N N N 0 -9.701 -2.639 -0.3
33 C33 C C33 N N N 0 -10.071 -1.992 1.061
34 C34 C C34 N N N 0 -8.771 -1.223 1.405
35 H1 H H1 N N N 0 0.738 -0.04 -2.293
36 H2 H H2 N N N 0 -1.521 0.94 -2.314
37 H3 H H3 N N N 0 -1.419 1.268 1.937
38 H4 H H4 N N N 0 0.841 0.291 1.958
39 H5 H H5 N N N 0 2.46 -1.079 0.78
40 H6 H H6 N N N 0 2.416 -1.22 -0.994
41 H7 H H7 N N N 0 3.027 1.456 -0.329
42 H8 H H8 N N N 0 5.67 -3.598 -0.443
43 H9 H H9 N N N 0 7.983 -4.414 -0.335
44 H10 H H10 N N N 0 9.455 -0.584 0.331
45 H11 H H11 N N N 0 5.344 2.067 -0.858
46 H12 H H12 N N N 0 -4.475 0.481 -2.175
47 H13 H H13 N N N 0 -4.451 -1.082 -1.32
48 H14 H H14 N N N 0 -6.709 0.975 -1.301
49 H15 H H15 N N N 0 -6.737 -0.627 -2.08
50 H16 H H16 N N N 0 -6.429 -1.699 0.145
51 H17 H H17 N N N 0 -6.655 1.168 1.167
52 H18 H H18 N N N 0 -6.644 -0.292 2.186
53 H19 H H19 N N N 0 -4.397 -0.871 1.405
54 H20 H H20 N N N 0 -4.38 0.807 2.009
55 H22 H H22 N N N 0 -9.419 -0.963 -1.652
56 H23 H H23 N N N 0 -8.0 -2.036 -1.51
57 H24 H H24 N N N 0 -10.596 -2.826 -0.894
58 H25 H H25 N N N 0 -9.139 -3.561 -0.152
59 H26 H H26 N N N 0 -10.913 -1.308 0.952
60 H27 H H27 N N N 0 -10.284 -2.755 1.81
61 H28 H H28 N N N 0 -8.038 -1.897 1.848
62 H29 H H29 N N N 0 -8.987 -0.397 2.083