Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1V2

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 56


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C13 C C13 N Y N 0 -5.956 0.594 -0.153
2 C14 C C14 N Y N 0 -7.319 0.678 -0.362
3 CL1 CL CL1 N N N 0 -8.062 2.225 -0.623
4 C15 C C15 N Y N 0 -8.093 -0.472 -0.365
5 CL2 CL CL2 N N N 0 -9.805 -0.36 -0.63
6 C16 C C16 N Y N 0 -7.506 -1.707 -0.158
7 C17 C C17 N Y N 0 -6.145 -1.802 0.053
8 C12 C C12 N Y N 0 -5.361 -0.649 0.056
9 C11 C C11 N Y N 0 -3.898 -0.746 0.282
10 N3 N N3 N Y N 0 -3.108 0.326 0.299
11 C10 C C10 N Y N 0 -3.278 -1.92 0.488
12 S1 S S1 N Y N 0 -1.559 -1.606 0.712
13 C9 C C9 N Y N 0 -1.844 0.119 0.506
14 N1 N N1 N N N 0 -0.87 1.104 0.559
15 C1 C C1 N Y N 0 0.479 0.748 0.647
16 C3 C C3 N Y N 0 0.951 -0.366 -0.035
17 C5 C C5 N Y N 0 2.285 -0.714 0.055
18 C2 C C2 N Y N 0 1.351 1.512 1.413
19 C4 C C4 N Y N 0 2.683 1.158 1.499
20 C6 C C6 N Y N 0 3.149 0.045 0.823
21 C7 C C7 N N N 0 4.603 -0.339 0.919
22 C8 C C8 N N N 0 5.389 0.357 -0.195
23 N2 N N2 N N N 0 6.806 -0.016 -0.101
24 C22 C C22 N N N 0 6.989 -1.452 -0.348
25 C21 C C21 N N N 0 8.451 -1.832 -0.1
26 C20 C C20 S N N 0 9.35 -1.016 -1.033
27 O2 O O2 N N N 0 10.72 -1.325 -0.767
28 C19 C C19 N N N 0 9.105 0.475 -0.79
29 C18 C C18 R N N 0 7.624 0.788 -1.018
30 C23 C C23 N N N 0 7.371 2.274 -0.757
31 O1 O O1 N N N 0 7.792 2.603 0.568
32 H1 H H1 N N N 0 -5.352 1.489 -0.155
33 H2 H H2 N N N 0 -8.114 -2.6 -0.161
34 H3 H H3 N N N 0 -5.689 -2.767 0.215
35 H4 H H4 N N N 0 -3.752 -2.89 0.513
36 H5 H H5 N N N 0 -1.124 2.04 0.534
37 H6 H H6 N N N 0 0.277 -0.959 -0.634
38 H7 H H7 N N N 0 2.653 -1.58 -0.475
39 H8 H H8 N N N 0 0.988 2.381 1.941
40 H9 H H9 N N N 0 3.362 1.751 2.094
41 H10 H H10 N N N 0 4.997 -0.032 1.888
42 H11 H H11 N N N 0 4.702 -1.419 0.812
43 H12 H H12 N N N 0 4.995 0.05 -1.164
44 H13 H H13 N N N 0 5.29 1.438 -0.088
45 H15 H H15 N N N 0 6.347 -2.021 0.326
46 H16 H H16 N N N 0 6.725 -1.681 -1.38
47 H17 H H17 N N N 0 8.712 -1.617 0.936
48 H18 H H18 N N N 0 8.59 -2.895 -0.297
49 H19 H H19 N N N 0 9.115 -1.26 -2.07
50 H20 H H20 N N N 0 10.945 -2.256 -0.896
51 H21 H H21 N N N 0 9.376 0.727 0.235
52 H22 H H22 N N N 0 9.711 1.061 -1.482
53 H23 H H23 N N N 0 7.357 0.549 -2.048
54 H24 H H24 N N N 0 7.932 2.87 -1.476
55 H25 H H25 N N N 0 6.306 2.485 -0.863
56 H26 H H26 N N N 0 7.661 3.532 0.803