Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1U0

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 53


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C2 C C2 N Y N 0 3.013 1.725 0.068
2 C2' C C2' N Y N 0 4.424 -3.455 0.947
3 C3 C C3 N Y N 0 2.868 0.811 -0.892
4 C4 C C4 N Y N 0 1.579 0.677 -1.38
5 C4' C C4' N Y N 0 5.229 -2.136 -0.756
6 C5 C C5 N Y N 0 0.678 1.48 -0.815
7 C5' C C5' N Y N 0 4.165 -1.254 -0.558
8 C6 C C6 N N N 0 -0.787 1.528 -1.168
9 C6' C C6' N Y N 0 3.246 -1.548 0.43
10 C7 C C7 N N N 0 -1.555 0.537 -0.291
11 C7' C C7' N N N 0 4.019 -0.016 -1.405
12 C8 C C8 R N N 0 4.309 2.061 0.759
13 C9 C C9 N N N 0 4.836 3.398 0.232
14 CM2 C CM2 N N N 0 4.563 -4.692 1.798
15 CM4 C CM4 N N N 0 1.223 -0.303 -2.468
16 H1 H H1 N N N 0 -8.941 0.764 -0.367
17 H10 H H10 N N N 0 0.217 -0.688 -2.296
18 H11 H H11 N N N 0 5.041 1.278 0.56
19 H12 H H12 N N N 0 3.446 2.838 2.418
20 H13 H H13 N N N 0 3.828 -0.304 -2.438
21 H14 H H14 N N N 0 4.937 0.569 -1.354
22 H15 H H15 N N N 0 2.408 -0.891 0.61
23 H16 H H16 N N N 0 4.036 -5.52 1.324
24 H17 H H17 N N N 0 5.618 -4.944 1.902
25 H18 H H18 N N N 0 4.135 -4.505 2.783
26 H19 H H19 N N N 0 6.96 -2.454 -1.809
27 H2 H H2 N N N 0 -7.46 -1.953 -0.99
28 H20 H H20 N N N 0 6.058 -1.142 -2.347
29 H21 H H21 N N N 0 4.921 3.352 -0.854
30 H22 H H22 N N N 0 4.147 4.195 0.509
31 H23 H H23 N N N 0 6.516 4.493 0.509
32 H3 H H3 N N N 0 -3.797 -2.095 -1.172
33 H4 H H4 N N N 0 -1.425 0.804 0.758
34 H5 H H5 N N N 0 -1.173 -0.47 -0.46
35 H6 H H6 N N N 0 -0.916 1.261 -2.217
36 H7 H H7 N N N 0 -1.169 2.535 -0.999
37 H8 H H8 N N N 0 1.259 0.199 -3.435
38 H9 H H9 N N N 0 1.934 -1.129 -2.461
39 N1' N N1' N Y N 0 3.406 -2.646 1.156
40 N3' N N3' N Y N 0 5.324 -3.214 0.015
41 N4' N N4' N N N 0 6.177 -1.885 -1.735
42 O10 O O10 N N N 0 6.121 3.66 0.8
43 O1A O O1A N N N 0 -3.982 -0.121 1.565
44 O1B O O1B N N N 0 -7.037 0.202 1.579
45 O2A O O2A N N N 0 -3.768 -1.883 -0.229
46 O2B O O2B N N N 0 -7.456 -1.665 -0.067
47 O3A O O3A N N N 0 -5.515 0.072 -0.431
48 O3B O O3B N N N 0 -8.021 0.834 -0.658
49 O7 O O7 N N N 0 -2.944 0.582 -0.625
50 O9 O O9 N N N 0 4.087 2.159 2.167
51 PA P PA N N N 0 -4.051 -0.333 0.102
52 PB P PB N N N 0 -7.008 -0.132 0.137
53 S1 S S1 N Y N 0 1.461 2.482 0.401