Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : 1TW

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 41


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1' C C1' R N N 0 -0.322 -0.119 -0.893
2 C2 C C2 N N N 0 -4.68 -0.959 -1.495
3 C2' C C2' S N N 0 -0.294 1.419 -0.756
4 C3' C C3' R N N 0 1.207 1.776 -0.841
5 C4 C C4 N Y N 0 -2.67 -0.886 -0.357
6 C4' C C4' R N N 0 1.908 0.412 -1.02
7 C5 C C5 N Y N 0 -3.275 -1.448 0.774
8 C5' C C5' N N N 0 3.232 0.388 -0.253
9 C6 C C6 N N N 0 -4.653 -1.761 0.719
10 C8 C C8 N Y N 0 -1.188 -1.121 1.257
11 CA' C CA' N N N 0 -0.746 3.906 0.906
12 H1 H H1 N N N 0 -0.256 -1.096 1.803
13 H10 H H10 N N N 0 1.538 2.258 0.078
14 H11 H H11 N N N 0 2.385 2.874 -2.07
15 H12 H H12 N N N 0 2.077 0.207 -2.077
16 H13 H H13 N N N 0 3.849 1.229 -0.569
17 H14 H H14 N N N 0 3.034 0.464 0.816
18 H15 H H15 N N Y 0 6.567 -0.178 -1.389
19 H16 H H16 N N N 0 6.612 -2.986 0.053
20 H2 H H2 N N N 0 -6.269 -1.717 -0.488
21 H3 H H3 N N N 0 -6.331 -0.929 -2.689
22 H4 H H4 N N N 0 -4.941 -0.323 -3.414
23 H5 H H5 N N N 0 -0.495 -0.407 -1.93
24 H6 H H6 N N N 0 -0.845 1.887 -1.571
25 H7 H H7 N N N 0 -1.117 4.361 1.824
26 H8 H H8 N N N 0 0.319 4.112 0.802
27 H9 H H9 N N N 0 -1.281 4.322 0.052
28 N1 N N1 N N N 0 -5.324 -1.508 -0.426
29 N2 N N2 N N N 0 -5.386 -0.713 -2.645
30 N3 N N3 N N N 0 -3.401 -0.658 -1.455
31 N7 N N7 N Y N 0 -2.317 -1.566 1.725
32 N9 N N9 N Y N 0 -1.357 -0.69 -0.027
33 O3' O O3' N N N 0 1.457 2.619 -1.968
34 O4' O O4' N N N 0 0.987 -0.552 -0.463
35 O5' O O5' N N N 0 3.918 -0.835 -0.525
36 O6 O O6 N N N 0 -5.221 -2.252 1.68
37 OP1 O OP1 N N N 0 5.267 -1.102 1.592
38 OP2 O OP2 N N N 0 5.759 -2.699 -0.3
39 OP3 O OP3 N N Y 0 6.459 -0.168 -0.428
40 P P P N N N 0 5.349 -1.199 0.117
41 SE2 SE SE2 N N N 0 -1.033 1.968 0.975