Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : 1OY

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 68


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 0.443 -0.884 1.486
2 C10 C C10 N N N 0 1.502 -1.516 0.62
3 N11 N N11 N N N 0 2.707 -0.926 0.49
4 C12 C C12 N N N 0 3.737 -1.541 -0.352
5 C13 C C13 N N N 0 4.998 -0.676 -0.328
6 C14 C C14 S N N 0 6.074 -1.318 -1.207
7 O14 O O14 N N N 0 6.464 -2.572 -0.643
8 C15 C C15 N N N 0 7.29 -0.393 -1.283
9 O15 O O15 N N N 0 8.246 -0.936 -2.195
10 O10 O O10 N N N 0 1.271 -2.556 0.041
11 N1 N N1 N N N 0 -0.592 -1.883 1.827
12 C2 C C2 S N N 0 -0.256 0.252 0.715
13 C21 C C21 N Y N 0 -0.138 1.548 1.473
14 C26 C C26 N Y N 0 -0.637 1.645 2.759
15 C25 C C25 N Y N 0 -0.529 2.835 3.455
16 C22 C C22 N Y N 0 0.475 2.641 0.885
17 F2 F F2 N N N 0 0.966 2.546 -0.37
18 C23 C C23 N Y N 0 0.582 3.833 1.584
19 CL2 CL CL2 N N N 0 1.35 5.205 0.847
20 C24 C C24 N Y N 0 0.078 3.929 2.867
21 C3 C C3 R N N 0 -1.737 -0.18 0.617
22 C37 C C37 N N N 0 -2.533 0.442 1.687
23 N37 N N37 N N N 0 -3.147 0.923 2.513
24 C31 C C31 N Y N 0 -2.304 0.165 -0.736
25 C32 C C32 N Y N 0 -1.687 -0.3 -1.885
26 F3 F F3 N N N 0 -0.573 -1.06 -1.793
27 C33 C C33 N Y N 0 -2.211 0.013 -3.127
28 C36 C C36 N Y N 0 -3.444 0.942 -0.831
29 C35 C C35 N Y N 0 -3.964 1.258 -2.071
30 C34 C C34 N Y N 0 -3.352 0.789 -3.22
31 CL3 CL CL3 N N N 0 -4.01 1.183 -4.777
32 C4 C C4 S N N 0 -1.663 -1.721 0.811
33 C41 C C41 N N N 0 -2.992 -2.268 1.335
34 C42 C C42 N N N 0 -2.889 -3.785 1.5
35 C45 C C45 N N N 0 -4.259 -4.351 1.882
36 C44 C C44 N N N 0 -2.429 -4.412 0.182
37 C43 C C43 N N N 0 -1.878 -4.111 2.6
38 H1 H H1 N N N 0 0.895 -0.491 2.397
39 H2 H H2 N N N 0 2.892 -0.094 0.953
40 H3 H H3 N N N 0 3.97 -2.535 0.028
41 H4 H H4 N N N 0 3.37 -1.619 -1.375
42 H5 H H5 N N N 0 4.765 0.319 -0.707
43 H6 H H6 N N N 0 5.365 -0.597 0.696
44 H7 H H7 N N N 0 5.676 -1.478 -2.209
45 H8 H H8 N N N 0 6.828 -2.505 0.25
46 H9 H H9 N N N 0 6.976 0.592 -1.629
47 H10 H H10 N N N 0 7.741 -0.303 -0.294
48 H11 H H11 N N N 0 9.045 -0.4 -2.293
49 H12 H H12 N N N 0 -0.95 -1.73 2.758
50 H14 H H14 N N N 0 0.177 0.355 -0.28
51 H15 H H15 N N N 0 -1.111 0.791 3.22
52 H16 H H16 N N N 0 -0.92 2.909 4.459
53 H17 H H17 N N N 0 0.161 4.858 3.413
54 H18 H H18 N N N 0 -1.73 -0.35 -4.024
55 H19 H H19 N N N 0 -3.927 1.301 0.066
56 H20 H H20 N N N 0 -4.855 1.865 -2.143
57 H21 H H21 N N N 0 -1.386 -2.213 -0.122
58 H22 H H22 N N N 0 -3.218 -1.812 2.299
59 H23 H H23 N N N 0 -3.786 -2.032 0.626
60 H24 H H24 N N N 0 -4.587 -3.904 2.821
61 H25 H H25 N N N 0 -4.979 -4.118 1.098
62 H26 H H26 N N N 0 -4.186 -5.432 2.0
63 H27 H H27 N N N 0 -2.356 -5.493 0.299
64 H28 H H28 N N N 0 -3.15 -4.179 -0.602
65 H29 H H29 N N N 0 -1.454 -4.009 -0.09
66 H30 H H30 N N N 0 -2.121 -3.542 3.497
67 H31 H H31 N N N 0 -1.916 -5.177 2.825
68 H32 H H32 N N N 0 -0.876 -3.847 2.263