Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1OY

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 68


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 0.443 -0.884 1.486
2 C10 C C10 N N N 0 1.502 -1.516 0.62
3 C12 C C12 N N N 0 3.737 -1.541 -0.352
4 C13 C C13 N N N 0 4.998 -0.676 -0.328
5 C14 C C14 S N N 0 6.074 -1.318 -1.207
6 C15 C C15 N N N 0 7.29 -0.393 -1.283
7 C2 C C2 S N N 0 -0.256 0.252 0.715
8 C21 C C21 N Y N 0 -0.138 1.548 1.473
9 C22 C C22 N Y N 0 0.475 2.641 0.885
10 C23 C C23 N Y N 0 0.582 3.833 1.584
11 C24 C C24 N Y N 0 0.078 3.929 2.867
12 C25 C C25 N Y N 0 -0.529 2.835 3.455
13 C26 C C26 N Y N 0 -0.637 1.645 2.759
14 C3 C C3 R N N 0 -1.737 -0.18 0.617
15 C31 C C31 N Y N 0 -2.304 0.165 -0.736
16 C32 C C32 N Y N 0 -1.687 -0.3 -1.885
17 C33 C C33 N Y N 0 -2.211 0.013 -3.127
18 C34 C C34 N Y N 0 -3.352 0.789 -3.22
19 C35 C C35 N Y N 0 -3.964 1.258 -2.071
20 C36 C C36 N Y N 0 -3.444 0.942 -0.831
21 C37 C C37 N N N 0 -2.533 0.442 1.687
22 C4 C C4 S N N 0 -1.663 -1.721 0.811
23 C41 C C41 N N N 0 -2.992 -2.268 1.335
24 C42 C C42 N N N 0 -2.889 -3.785 1.5
25 C43 C C43 N N N 0 -1.878 -4.111 2.6
26 C44 C C44 N N N 0 -2.429 -4.412 0.182
27 C45 C C45 N N N 0 -4.259 -4.351 1.882
28 CL2 CL CL2 N N N 0 1.35 5.205 0.847
29 CL3 CL CL3 N N N 0 -4.01 1.183 -4.777
30 F2 F F2 N N N 0 0.966 2.546 -0.37
31 F3 F F3 N N N 0 -0.573 -1.06 -1.793
32 H1 H H1 N N N 0 0.895 -0.491 2.397
33 H10 H H10 N N N 0 7.741 -0.303 -0.294
34 H11 H H11 N N N 0 9.045 -0.4 -2.293
35 H12 H H12 N N N 0 -0.95 -1.73 2.758
36 H14 H H14 N N N 0 0.177 0.355 -0.28
37 H15 H H15 N N N 0 -1.111 0.791 3.22
38 H16 H H16 N N N 0 -0.92 2.909 4.459
39 H17 H H17 N N N 0 0.161 4.858 3.413
40 H18 H H18 N N N 0 -1.73 -0.35 -4.024
41 H19 H H19 N N N 0 -3.927 1.301 0.066
42 H2 H H2 N N N 0 2.892 -0.094 0.953
43 H20 H H20 N N N 0 -4.855 1.865 -2.143
44 H21 H H21 N N N 0 -1.386 -2.213 -0.122
45 H22 H H22 N N N 0 -3.218 -1.812 2.299
46 H23 H H23 N N N 0 -3.786 -2.032 0.626
47 H24 H H24 N N N 0 -4.587 -3.904 2.821
48 H25 H H25 N N N 0 -4.979 -4.118 1.098
49 H26 H H26 N N N 0 -4.186 -5.432 2.0
50 H27 H H27 N N N 0 -2.356 -5.493 0.299
51 H28 H H28 N N N 0 -3.15 -4.179 -0.602
52 H29 H H29 N N N 0 -1.454 -4.009 -0.09
53 H3 H H3 N N N 0 3.97 -2.535 0.028
54 H30 H H30 N N N 0 -2.121 -3.542 3.497
55 H31 H H31 N N N 0 -1.916 -5.177 2.825
56 H32 H H32 N N N 0 -0.876 -3.847 2.263
57 H4 H H4 N N N 0 3.37 -1.619 -1.375
58 H5 H H5 N N N 0 4.765 0.319 -0.707
59 H6 H H6 N N N 0 5.365 -0.597 0.696
60 H7 H H7 N N N 0 5.676 -1.478 -2.209
61 H8 H H8 N N N 0 6.828 -2.505 0.25
62 H9 H H9 N N N 0 6.976 0.592 -1.629
63 N1 N N1 N N N 0 -0.592 -1.883 1.827
64 N11 N N11 N N N 0 2.707 -0.926 0.49
65 N37 N N37 N N N 0 -3.147 0.923 2.513
66 O10 O O10 N N N 0 1.271 -2.556 0.041
67 O14 O O14 N N N 0 6.464 -2.572 -0.643
68 O15 O O15 N N N 0 8.246 -0.936 -2.195