Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1OK

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 68


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C13 C C13 N Y N 0 5.457 1.007 -0.121
2 C18 C C18 N Y N 0 4.544 0.663 -1.127
3 C17 C C17 N Y N 0 3.212 0.63 -0.849
4 C16 C C16 N Y N 0 2.736 0.936 0.431
5 C15 C C15 N Y N 0 3.609 1.278 1.443
6 C21 C C21 R N N 0 0.432 0.531 -0.384
7 C22 C C22 N Y N 0 -0.922 1.124 -0.091
8 C23 C C23 N N N 0 0.317 -0.97 -0.463
9 C24 C C24 N Y N 0 -1.678 1.659 -1.118
10 C11 C C11 N Y N 0 5.927 1.654 2.171
11 C12 C C12 N Y N 0 4.983 1.318 1.179
12 C34 C C34 N N N 0 -5.633 1.497 2.531
13 C27 C C27 N Y N 0 -2.648 1.675 1.477
14 C33 C C33 N N N 0 -5.017 2.828 2.094
15 N1 N N1 N N N 0 -0.492 -1.536 -1.38
16 S2 S S2 N N N 0 -0.618 -3.185 -1.467
17 C3 C C3 N Y N 0 -1.352 -3.732 0.039
18 C4 C C4 N Y N 0 -2.726 -3.837 0.14
19 C5 C C5 N Y N 0 -3.302 -4.266 1.322
20 C6 C C6 N Y N 0 -2.502 -4.589 2.402
21 C7 C C7 N Y N 0 -1.128 -4.484 2.301
22 C8 C C8 N Y N 0 -0.552 -4.061 1.118
23 N9 N N9 N Y N 0 7.67 1.374 0.622
24 C10 C C10 N Y N 0 7.247 1.668 1.844
25 C14 C C14 N Y N 0 6.848 1.05 -0.359
26 N19 N N19 N N N 0 7.348 0.753 -1.615
27 N20 N N20 N N N 0 1.365 0.893 0.686
28 C25 C C25 N Y N 0 -2.922 2.204 -0.851
29 C26 C C26 N Y N 0 -3.41 2.212 0.453
30 C28 C C28 N Y N 0 -1.408 1.127 1.203
31 O29 O O29 N N N 0 -4.632 2.746 0.72
32 O30 O O30 N N N 0 -3.667 2.731 -1.86
33 C31 C C31 N N N 0 -3.103 2.688 -3.172
34 C32 C C32 N N N 0 -4.077 3.322 -4.167
35 C35 C C35 N N N 0 -6.046 3.948 2.269
36 O36 O O36 N N N 0 0.952 -1.667 0.299
37 O37 O O37 N N N 0 -1.559 -3.461 -2.495
38 O38 O O38 N N N 0 0.71 -3.69 -1.473
39 H1 H H1 N N N 0 4.896 0.426 -2.12
40 H2 H H2 N N N 0 2.513 0.364 -1.628
41 H3 H H3 N N N 0 3.236 1.514 2.429
42 H4 H H4 N N N 0 0.8 0.918 -1.334
43 H5 H H5 N N N 0 -1.297 1.651 -2.129
44 H6 H H6 N N N 0 5.607 1.897 3.174
45 H7 H H7 N N N 0 -5.927 1.56 3.579
46 H8 H H8 N N N 0 -6.509 1.284 1.92
47 H9 H H9 N N N 0 -4.9 0.7 2.406
48 H10 H H10 N N N 0 -3.024 1.681 2.49
49 H11 H H11 N N N 0 -4.141 3.042 2.705
50 H12 H H12 N N N 0 -0.999 -0.978 -1.99
51 H13 H H13 N N N 0 -3.351 -3.584 -0.704
52 H14 H H14 N N N 0 -4.376 -4.347 1.401
53 H15 H H15 N N N 0 -2.952 -4.923 3.326
54 H16 H H16 N N N 0 -0.503 -4.736 3.145
55 H17 H H17 N N N 0 0.522 -3.978 1.039
56 H18 H H18 N N N 0 7.971 1.926 2.602
57 H19 H H19 N N N 0 6.742 0.515 -2.334
58 H20 H H20 N N N 0 8.304 0.783 -1.776
59 H21 H H21 N N N 0 1.03 1.104 1.571
60 H22 H H22 N N N 0 -0.817 0.705 2.002
61 H23 H H23 N N N 0 -2.163 3.241 -3.182
62 H24 H H24 N N N 0 -2.918 1.652 -3.455
63 H25 H H25 N N N 0 -5.017 2.77 -4.157
64 H26 H H26 N N N 0 -4.262 4.358 -3.885
65 H27 H H27 N N N 0 -3.647 3.29 -5.168
66 H28 H H28 N N N 0 -6.34 4.01 3.316
67 H29 H H29 N N N 0 -5.608 4.896 1.957
68 H30 H H30 N N N 0 -6.923 3.734 1.657