Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1OJ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 71


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 7.009 3.617 -1.782
2 C10 C C10 N Y N 0 3.598 2.619 -0.828
3 C12 C C12 R N N 0 1.007 0.694 1.056
4 C13 C C13 N N N 0 -0.41 1.117 1.347
5 C16 C C16 N Y N 0 1.002 -0.668 0.41
6 C17 C C17 N Y N 0 1.385 -1.778 1.139
7 C18 C C18 N Y N 0 1.381 -3.031 0.547
8 C19 C C19 N Y N 0 0.991 -3.168 -0.782
9 C20 C C20 N Y N 0 0.608 -2.051 -1.507
10 C21 C C21 N Y N 0 0.614 -0.804 -0.91
11 C24 C C24 N N N 0 2.151 -3.908 2.619
12 C25 C C25 N N N 0 2.545 -5.242 3.256
13 C26 C C26 N N N 0 0.46 -4.479 -2.694
14 C27 C C27 N N N 0 -0.048 -5.899 -2.952
15 C28 C C28 N N N 0 1.559 -4.139 -3.702
16 C3 C C3 N Y N 0 7.184 2.096 -0.043
17 C32 C C32 N Y N 0 -3.612 0.479 1.453
18 C33 C C33 N Y N 0 -4.181 -0.776 1.561
19 C34 C C34 N Y N 0 -4.973 -1.266 0.54
20 C35 C C35 N Y N 0 -5.194 -0.502 -0.591
21 C36 C C36 N Y N 0 -4.624 0.753 -0.699
22 C37 C C37 N Y N 0 -3.833 1.243 0.323
23 C4 C C4 N Y N 0 5.788 1.969 0.025
24 C5 C C5 N Y N 0 4.994 2.724 -0.878
25 C6 C C6 N Y N 0 5.648 3.569 -1.795
26 C7 C C7 N Y N 0 5.164 1.121 0.954
27 C8 C C8 N Y N 0 3.808 1.031 0.981
28 C9 C C9 N Y N 0 3.017 1.773 0.094
29 H1 H H1 N N N 0 1.687 -1.67 2.17
30 H10 H H10 N N N 0 0.775 -6.605 -2.843
31 H11 H H11 N N N 0 -4.008 -1.373 2.444
32 H12 H H12 N N N 0 7.518 4.26 -2.485
33 H13 H H13 N N N 0 7.811 1.533 0.632
34 H14 H H14 N N N 0 5.082 4.161 -2.499
35 H15 H H15 N N N 0 5.759 0.542 1.645
36 H16 H H16 N N N 0 3.332 0.377 1.697
37 H17 H H17 N N N 0 2.983 3.188 -1.509
38 H18 H H18 N N N 0 1.074 2.226 -0.412
39 H19 H H19 N N N 0 -0.591 0.024 3.032
40 H2 H H2 N N N 0 0.305 -2.155 -2.538
41 H20 H H20 N N N 0 1.696 -5.924 3.224
42 H21 H H21 N N N 0 3.38 -5.675 2.704
43 H22 H H22 N N N 0 2.841 -5.077 4.292
44 H23 H H23 N N N 0 -0.364 -3.773 -2.803
45 H24 H H24 N N N 0 1.921 -3.128 -3.518
46 H25 H H25 N N N 0 2.383 -4.845 -3.592
47 H26 H H26 N N N 0 1.158 -4.203 -4.713
48 H27 H H27 N N N 0 -5.812 -0.885 -1.389
49 H28 H H28 N N N 0 -3.388 2.224 0.238
50 H29 H H29 N N N 0 -6.356 3.507 -2.279
51 H3 H H3 N N N 0 0.315 0.066 -1.476
52 H30 H H30 N N N 0 -6.959 2.3 -1.277
53 H4 H H4 N N N 0 3.001 -3.225 2.651
54 H5 H H5 N N N 0 1.317 -3.474 3.171
55 H6 H H6 N N N 0 1.572 0.652 1.987
56 H7 H H7 N N N 0 -5.414 -2.248 0.622
57 H8 H H8 N N N 0 -0.832 -6.141 -2.234
58 H9 H H9 N N N 0 -0.45 -5.963 -3.963
59 N11 N N11 N N N 0 1.629 1.662 0.149
60 N15 N N15 N N N 0 -1.046 0.64 2.435
61 N2 N N2 N Y N 0 7.726 2.901 -0.928
62 N41 N N41 N N N 0 -6.261 2.637 -1.86
63 O14 O O14 N N N 0 -0.98 1.882 0.599
64 O22 O O22 N N N 0 0.986 -4.395 -1.368
65 O23 O O23 N N N 0 1.764 -4.123 1.261
66 O30 O O30 N N N 0 -2.994 0.412 3.933
67 O31 O O31 N N N 0 -2.631 2.52 2.64
68 O39 O O39 N N N 0 -3.82 2.639 -2.226
69 O40 O O40 N N N 0 -5.241 0.818 -3.18
70 S29 S S29 N N N 0 -2.603 1.104 2.755
71 S38 S S38 N N N 0 -4.906 1.727 -2.14