Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1NJ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 70


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 -1.395 -0.015 -0.148
2 C2 C C2 N N N 0 -2.422 -0.631 -0.353
3 N3 N N3 N N N 0 -3.575 0.033 -0.564
4 C5 C C5 N Y N 0 -3.61 1.423 -0.452
5 C6 C C6 N Y N 0 -4.434 2.166 -1.291
6 C8 C C8 N Y N 0 -4.47 3.539 -1.183
7 C10 C C10 N Y N 0 -3.68 4.184 -0.23
8 C11 C C11 N N N 0 -3.717 5.658 -0.111
9 N12 N N12 N N N 0 -2.936 6.293 0.83
10 N15 N N15 N N N 0 -4.489 6.356 -0.896
11 C17 C C17 N Y N 0 -2.854 3.435 0.611
12 C19 C C19 N Y N 0 -2.826 2.062 0.502
13 C21 C C21 N Y N 0 -2.405 -2.111 -0.376
14 N22 N N22 N Y N 0 -3.528 -2.779 -0.605
15 C23 C C23 N Y N 0 -3.556 -4.098 -0.635
16 O24 O O24 N N N 0 -4.729 -4.735 -0.874
17 C25 C C25 N N N 0 -5.881 -3.916 -1.082
18 C29 C C29 N Y N 0 -2.399 -4.848 -0.425
19 C31 C C31 N Y N 0 -1.206 -4.199 -0.183
20 C33 C C33 N Y N 0 -1.2 -2.798 -0.161
21 C34 C C34 N Y N 0 0.053 -2.056 0.094
22 C35 C C35 N Y N 0 1.107 -2.13 -0.815
23 C37 C C37 N Y N 0 2.275 -1.439 -0.579
24 C39 C C39 N Y N 0 0.183 -1.266 1.255
25 C40 C C40 N N N 0 -0.931 -1.179 2.219
26 O41 O O41 N N N 0 -1.962 -1.787 2.013
27 O43 O O43 N N N 0 -0.804 -0.423 3.327
28 C44 C C44 N Y N 0 1.365 -0.571 1.488
29 C46 C C46 N Y N 0 2.413 -0.659 0.573
30 C47 C C47 N N N 0 3.669 0.079 0.817
31 O48 O O48 N N N 0 3.789 0.763 1.816
32 N49 N N49 N N N 0 4.683 -0.0050 -0.066
33 C51 C C51 S N N 0 5.929 0.726 0.176
34 C53 C C53 N N N 0 5.789 2.158 -0.344
35 O56 O O56 N N N 0 5.583 2.134 -1.758
36 C58 C C58 N N N 0 7.08 0.03 -0.552
37 C59 C C59 N N N 0 8.351 0.871 -0.421
38 C63 C C63 N N N 0 7.315 -1.349 0.068
39 C67 C C67 N N N 0 6.725 -0.13 -2.032
40 H1 H H1 N N N 0 -4.381 -0.456 -0.794
41 H2 H H2 N N N 0 -5.046 1.667 -2.028
42 H3 H H3 N N N 0 -5.11 4.116 -1.834
43 H4 H H4 N N N 0 -2.362 5.774 1.414
44 H5 H H5 N N N 0 -2.96 7.26 0.908
45 H6 H H6 N N N 0 -4.513 7.322 -0.818
46 H7 H H7 N N N 0 -2.241 3.932 1.348
47 H8 H H8 N N N 0 -2.19 1.482 1.155
48 H9 H H9 N N N 0 -6.056 -3.303 -0.198
49 H10 H H10 N N N 0 -5.718 -3.271 -1.945
50 H11 H H11 N N N 0 -6.75 -4.55 -1.261
51 H12 H H12 N N N 0 -2.437 -5.927 -0.449
52 H13 H H13 N N N 0 -0.296 -4.758 -0.017
53 H14 H H14 N N N 0 1.007 -2.731 -1.707
54 H15 H H15 N N N 0 3.088 -1.501 -1.287
55 H16 H H16 N N N 0 -1.561 -0.396 3.929
56 H17 H H17 N N N 0 1.471 0.036 2.375
57 H18 H H18 N N N 0 4.589 -0.55 -0.863
58 H19 H H19 N N N 0 6.136 0.747 1.246
59 H20 H H20 N N N 0 4.938 2.639 0.139
60 H21 H H21 N N N 0 6.698 2.717 -0.119
61 H22 H H22 N N N 0 5.485 3.009 -2.157
62 H23 H H23 N N N 0 8.604 0.985 0.633
63 H24 H H24 N N N 0 9.171 0.375 -0.94
64 H25 H H25 N N N 0 8.184 1.854 -0.862
65 H26 H H26 N N N 0 6.41 -1.949 -0.026
66 H27 H H27 N N N 0 8.135 -1.846 -0.451
67 H28 H H28 N N N 0 7.568 -1.235 1.122
68 H29 H H29 N N N 0 6.782 0.84 -2.526
69 H30 H H30 N N N 0 7.427 -0.819 -2.501
70 H31 H H31 N N N 0 5.713 -0.526 -2.122