Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1HD

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 21


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C C C N N N 0 2.527 -0.729 -0.085
2 C1 C C1 N N N 0 -3.523 0.814 0.257
3 CA C CA S N N 0 1.342 0.172 0.266
4 CB C CB N N N 0 0.035 -0.573 -0.0090
5 CD C CD N N N 0 -2.358 -0.114 0.029
6 H1 H H1 N N N 0 1.35 1.165 -1.538
7 H10 H H10 N N N 0 -0.941 1.245 0.491
8 H11 H H11 N N N 0 4.54 -0.594 0.087
9 H12 H H12 N N N 0 2.441 -1.671 0.459
10 H13 H H13 N N N 0 2.528 -0.928 -1.156
11 H2 H H2 N N N 0 0.658 2.031 -0.297
12 H4 H H4 N N N 0 1.391 0.443 1.321
13 H5 H H5 N N N 0 0.025 -0.921 -1.042
14 H6 H H6 N N N 0 -0.045 -1.428 0.663
15 H7 H H7 N N N 0 -3.845 0.746 1.296
16 H8 H H8 N N N 0 -3.221 1.838 0.037
17 H9 H H9 N N N 0 -4.347 0.531 -0.398
18 N N N N N N 0 1.393 1.39 -0.555
19 N1 N N1 N N N 0 -1.098 0.329 0.212
20 O1 O O1 N N Y 0 3.746 -0.079 0.281
21 OE1 O OE1 N N N 0 -2.554 -1.259 -0.319