Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1G5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 80


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 8.665 1.297 -1.101
2 C11 C C11 S N N 0 2.648 -0.623 0.414
3 C12 C C12 N N N 0 2.387 -0.27 1.879
4 C13 C C13 N N N 0 3.554 -0.763 2.738
5 C14 C C14 N N N 0 2.253 1.247 2.023
6 C15 C C15 N N N 0 1.499 -0.138 -0.432
7 C18 C C18 S N N 0 -0.864 -0.126 -1.025
8 C19 C C19 N N N 0 -2.15 -0.262 -0.251
9 C2 C C2 N Y N 0 8.727 0.137 -0.34
10 C21 C C21 S N N 0 -4.567 -0.019 -0.058
11 C22 C C22 N N N 0 -5.591 0.985 -0.59
12 C23 C C23 N N N 0 -5.113 -1.439 -0.222
13 C24 C C24 N Y N 0 -5.108 2.387 -0.318
14 C25 C C25 N Y N 0 -5.442 3.015 0.867
15 C26 C C26 N Y N 0 -4.999 4.301 1.117
16 C27 C C27 N Y N 0 -4.221 4.957 0.182
17 C28 C C28 N Y N 0 -3.886 4.328 -1.003
18 C29 C C29 N Y N 0 -4.325 3.041 -1.251
19 C3 C C3 N Y N 0 7.561 -0.478 0.083
20 C30 C C30 N N N 0 -3.738 6.359 0.454
21 C35 C C35 N N N 0 -4.146 -2.435 0.422
22 C39 C C39 N N N 0 -3.514 -5.109 1.046
23 C4 C C4 N Y N 0 6.324 0.072 -0.258
24 C40 C C40 N N N 0 -0.947 -0.965 -2.302
25 C5 C C5 N Y N 0 6.272 1.239 -1.023
26 C6 C C6 N Y N 0 7.441 1.843 -1.439
27 C7 C C7 N N N 0 7.626 -1.737 0.908
28 C9 C C9 N N N 0 5.074 -0.577 0.19
29 H1 H H1 N N N 0 7.51 -2.604 0.258
30 H10 H H10 N N N 0 1.466 -0.749 2.21
31 H11 H H11 N N N 0 3.368 -0.512 3.782
32 H12 H H12 N N N 0 3.65 -1.844 2.635
33 H13 H H13 N N N 0 4.476 -0.284 2.407
34 H14 H H14 N N N 0 1.422 1.598 1.411
35 H15 H H15 N N N 0 2.067 1.498 3.067
36 H16 H H16 N N N 0 3.175 1.726 1.692
37 H17 H H17 N N N 0 0.096 -1.241 0.506
38 H18 H H18 N N N 0 -0.707 0.92 -1.287
39 H19 H H19 N N N 0 -1.721 -0.559 -2.954
40 H2 H H2 N N N 0 8.589 -1.789 1.415
41 H20 H H20 N N N 0 0.013 -0.938 -2.818
42 H21 H H21 N N N 0 -1.339 -2.906 -2.728
43 H22 H H22 N N N 0 -3.329 0.47 -1.713
44 H23 H H23 N N N 0 -4.378 0.178 0.997
45 H24 H H24 N N N 0 -5.218 -1.668 -1.282
46 H25 H H25 N N N 0 -6.086 -1.512 0.264
47 H26 H H26 N N N 0 -4.041 -2.206 1.482
48 H27 H H27 N N N 0 -3.173 -2.362 -0.064
49 H28 H H28 N N N 0 -2.559 -4.957 0.542
50 H29 H H29 N N N 0 -3.427 -4.801 2.089
51 H3 H H3 N N N 0 6.826 -1.728 1.648
52 H30 H H30 N N N 0 -3.785 -6.163 1.0
53 H31 H H31 N N N 0 -5.714 0.845 -1.664
54 H32 H H32 N N N 0 -6.547 0.828 -0.091
55 H33 H H33 N N N 0 -6.05 2.502 1.598
56 H34 H H34 N N N 0 -5.261 4.792 2.042
57 H35 H H35 N N N 0 -3.632 6.896 -0.489
58 H36 H H36 N N N 0 -4.459 6.875 1.087
59 H37 H H37 N N N 0 -2.092 7.232 1.329
60 H38 H H38 N N N 0 -2.495 5.756 1.981
61 H4 H H4 N N N 0 10.298 -0.068 0.818
62 H40 H H40 N N N 0 -3.277 4.841 -1.733
63 H41 H H41 N N N 0 -4.06 2.549 -2.174
64 H5 H H5 N N N 0 9.576 1.772 -1.433
65 H6 H H6 N N N 0 7.399 2.745 -2.031
66 H7 H H7 N N N 0 5.318 1.668 -1.289
67 H8 H H8 N N N 0 3.853 0.878 -0.484
68 H9 H H9 N N N 0 2.744 -1.704 0.311
69 N10 N N10 N N N 0 3.887 0.021 -0.031
70 N17 N N17 N N N 0 0.253 -0.598 -0.203
71 N20 N N20 N N N 0 -3.317 0.113 -0.811
72 N31 N N31 N N N 0 -2.438 6.304 1.135
73 O16 O O16 N N N 0 1.695 0.666 -1.318
74 O32 O O32 N N N 0 5.117 -1.651 0.758
75 O33 O O33 N N N 0 -2.135 -0.709 0.877
76 O37 O O37 N N N 0 -5.998 -4.229 0.974
77 O38 O O38 N N N 0 -4.803 -4.444 -1.155
78 O41 O O41 N N N 0 -1.27 -2.316 -1.965
79 O8 O O8 N N N 0 9.933 -0.398 -0.014
80 S36 S S36 N N N 0 -4.794 -4.118 0.228