Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1DZ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C01 N Y N 0 0.663 0.875 0.051
2 C04 C C04 N Y N 0 2.608 -0.176 -0.014
3 C05 C C05 N Y N 0 2.009 1.095 0.133
4 C06 C C06 N Y N 0 -0.405 1.895 0.14
5 C07 C C07 N Y N 0 -0.744 -1.11 -0.271
6 C08 C C08 N Y N 0 -1.68 1.539 0.581
7 C09 C C09 N Y N 0 -2.67 2.496 0.667
8 C10 C C10 N Y N 0 -2.401 3.807 0.318
9 C11 C C11 N Y N 0 -1.138 4.167 -0.12
10 C12 C C12 N Y N 0 -0.14 3.22 -0.211
11 C13 C C13 N Y N 0 -1.716 -0.579 -1.108
12 C14 C C14 N Y N 0 -2.935 -1.215 -1.24
13 C15 C C15 N Y N 0 -3.188 -2.38 -0.539
14 C16 C C16 N Y N 0 -2.221 -2.912 0.295
15 C17 C C17 N Y N 0 -0.999 -2.284 0.427
16 C18 C C18 N N N 0 -2.501 -4.182 1.057
17 C19 C C19 N N N 0 4.054 -0.468 0.0050
18 H051 H H051 N N N 0 2.509 2.041 0.28
19 H081 H H081 N N N 0 -1.891 0.515 0.853
20 H091 H H091 N N N 0 -3.657 2.221 1.008
21 H1 H H1 N N N 0 5.444 -1.876 -0.129
22 H101 H H101 N N N 0 -3.179 4.553 0.387
23 H111 H H111 N N N 0 -0.934 5.193 -0.391
24 H121 H H121 N N N 0 0.846 3.503 -0.548
25 H131 H H131 N N N 0 -1.52 0.331 -1.656
26 H141 H H141 N N N 0 -3.692 -0.802 -1.89
27 H151 H H151 N N N 0 -4.142 -2.876 -0.644
28 H171 H H171 N N N 0 -0.245 -2.7 1.079
29 H181 H H181 N N N 0 -2.195 -5.04 0.457
30 H182 H H182 N N N 0 -3.567 -4.25 1.271
31 H183 H H183 N N N 0 -1.941 -4.175 1.992
32 N02 N N02 N Y N 0 0.493 -0.468 -0.136
33 N03 N N03 N Y N 0 1.635 -1.054 -0.17
34 O20 O O20 N N N 0 4.854 0.434 0.158
35 O21 O O21 N N N 0 4.488 -1.734 -0.148