Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 19V

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 87


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 5.452 -0.155 0.486
2 C2 C C2 R N N 0 6.117 0.96 1.296
3 C6 C C6 S N N 0 6.021 -0.162 -0.934
4 C3 C C3 N N N 0 7.627 0.719 1.352
5 C4 C C4 N N N 0 8.195 0.712 -0.069
6 C5 C C5 N N N 0 7.53 -0.403 -0.878
7 C8 C C8 N N N 0 5.744 1.187 -1.601
8 C9 C C9 N N N 0 7.918 2.061 -0.736
9 C10 C C10 N N N 0 6.408 2.302 -0.792
10 C11 C C11 N N N 0 9.682 0.475 -0.014
11 C15 C C15 N Y N 0 1.411 -3.079 -0.331
12 C16 C C16 N Y N 0 0.947 -1.809 -0.029
13 C18 C C18 N N N 0 0.072 0.701 0.938
14 C20 C C20 N Y N 0 -2.236 0.006 0.322
15 C21 C C21 N Y N 0 -2.682 0.6 -0.855
16 C24 C C24 N Y N 0 -4.367 0.012 1.21
17 C25 C C25 N N N 0 -6.956 0.499 1.201
18 C26 C C26 N N N 0 -8.427 0.909 1.094
19 C28 C C28 N N N 0 -6.844 0.274 -1.206
20 C29 C C29 N N N 0 -10.457 0.588 -0.186
21 C31 C C31 N N N 0 -10.646 2.102 -0.289
22 C32 C C32 N N N 0 -11.042 -0.084 -1.43
23 N7 N N7 N N N 0 -9.024 0.279 -0.091
24 C30 C C30 N N N 0 -11.175 0.067 1.06
25 C27 C C27 N N N 0 -8.315 0.684 -1.313
26 N6 N N6 N N N 0 -6.247 0.905 -0.021
27 C23 C C23 N Y N 0 -4.881 0.61 0.07
28 C22 C C22 N Y N 0 -4.023 0.909 -0.988
29 N5 N N5 N Y N 0 -3.08 -0.269 1.303
30 N3 N N3 N N N 0 -0.887 -0.31 0.465
31 C19 C C19 N N N 0 1.318 0.636 0.044
32 C17 C C17 N Y N 0 -0.418 -1.595 0.162
33 C14 C C14 N Y N 0 -1.305 -2.654 0.049
34 C13 C C13 N Y N 0 -0.833 -3.919 -0.253
35 C12 C C12 N Y N 0 0.519 -4.129 -0.448
36 N4 N N4 N N N 0 1.845 -0.736 0.089
37 C33 C C33 N N N 0 3.166 -0.96 0.24
38 O2 O O2 N N N 0 3.598 -2.095 0.203
39 N1 N N1 N N N 0 4.007 0.076 0.433
40 C7 C C7 N N N 0 5.84 2.309 0.629
41 O1 O O1 N N N 0 10.233 0.326 1.056
42 N2 N N2 N N N 0 10.4 0.428 -1.154
43 H1 H H1 N N N 0 5.65 -1.116 0.961
44 H2 H H2 N N N 0 5.712 0.965 2.308
45 H3 H H3 N N N 0 8.101 1.514 1.928
46 H4 H H4 N N N 0 7.824 -0.242 1.827
47 H8 H H8 N N N 0 6.148 1.182 -2.613
48 H5 H H5 N N N 0 7.935 -0.408 -1.89
49 H6 H H6 N N N 0 7.728 -1.364 -0.403
50 H7 H H7 N N N 0 5.547 -0.956 -1.511
51 H9 H H9 N N N 0 4.668 1.358 -1.641
52 H10 H H10 N N N 0 8.392 2.856 -0.159
53 H11 H H11 N N N 0 8.323 2.056 -1.748
54 H12 H H12 N N N 0 6.211 3.263 -1.267
55 H13 H H13 N N N 0 2.468 -3.247 -0.481
56 H14 H H14 N N N 0 -0.377 1.692 0.873
57 H15 H H15 N N N 0 0.348 0.49 1.971
58 H16 H H16 N N N 0 -1.989 0.817 -1.654
59 H17 H H17 N N N 0 -5.026 -0.226 2.032
60 H18 H H18 N N N 0 -6.503 0.989 2.063
61 H19 H H19 N N N 0 -6.887 -0.582 1.319
62 H20 H H20 N N N 0 -8.96 0.584 1.987
63 H21 H H21 N N N 0 -8.496 1.993 1.004
64 H22 H H22 N N N 0 -6.775 -0.81 -1.116
65 H23 H H23 N N N 0 -6.311 0.599 -2.099
66 H24 H H24 N N N 0 -10.134 2.473 -1.177
67 H25 H H25 N N N 0 -11.709 2.332 -0.359
68 H26 H H26 N N N 0 -10.229 2.581 0.597
69 H27 H H27 N N N 0 -10.907 -1.164 -1.357
70 H28 H H28 N N N 0 -12.105 0.145 -1.501
71 H29 H H29 N N N 0 -10.53 0.286 -2.318
72 H31 H H31 N N N 0 -10.758 0.546 1.946
73 H32 H H32 N N N 0 -12.238 0.296 0.99
74 H33 H H33 N N N 0 -11.04 -1.012 1.133
75 H37 H H37 N N N 0 1.049 0.893 -0.981
76 H34 H H34 N N N 0 -8.383 1.765 -1.431
77 H35 H H35 N N N 0 -8.767 0.194 -2.175
78 H36 H H36 N N N 0 -4.397 1.37 -1.889
79 H38 H H38 N N N 0 2.072 1.332 0.412
80 H39 H H39 N N N 0 -2.362 -2.492 0.198
81 H40 H H40 N N N 0 -1.525 -4.743 -0.344
82 H41 H H41 N N N 0 0.881 -5.119 -0.685
83 H42 H H42 N N N 0 3.655 0.974 0.536
84 H43 H H43 N N N 0 4.765 2.481 0.589
85 H44 H H44 N N N 0 6.314 3.104 1.206
86 H45 H H45 N N N 0 9.959 0.547 -2.01
87 H46 H H46 N N N 0 11.357 0.275 -1.118